Gene Bcen_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0366 
Symbol 
ID4091495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp408222 
End bp409001 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID638013625 
Productextracellular solute-binding protein 
Protein accessionYP_620251 
Protein GI107021924 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.996881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGA AGCTTTCCCT CTGCGCCGCT GCGGCGCTCG CGTGCGCGGC CGTCACGGCC 
CATGCGGAAC CGACCACGTT GCGCTTCGGG ATCGAAGCCG CCTATCCGCC GTTCGAGAGC
AAGACGCCGG CCGGTCAGCT GCAGGGTTTC GACGTCGACG TCGGCAACGC GGTGTGCGCG
AAGCTGAACA TGAAGTGCGT GTGGGTCGAG AATGCGTTCG ACGGGCTGAT TCCGGCGCTG
CAGGCGCGCA AGTTCGACGC GATCAACTCG GCGATGAACA TCACCGCGAA GCGCAAGCAG
AGCATCGACT TCACGCCGCC GATCTACGTG GTGCCGATCG TGATGGTCGC GAAGCGCGGC
TCGCCGCTGA AACCCGACGT CGCGAGCCTG CGTGGCAAGC ACGTCGGCGT GCTGCAGGGT
TCGTCGCAGG AGGATTTCCT GAAGGCGCAC TGGGCCAATG CGGGCGTGGC CGTGGTGTCG
TACCAGGATC AGGACCAGAT CTACGCCGAT CTCGTCGCGG GGCGTCTCGA CGCGGCCGTG
CAGGAAGCGC AGACCGCGCA GGACGGATTC CTCGACAAGC CGGCCGGCCG CGACTACCAG
ATCGTCGGCG AGCCGCTGAA GGATCCGGCG ACGCTCGGCG AAGGCACCGG CTTCGGGCTG
CGCAAGAACG ACAAGGCGTT GCAGGCGAAG ATCGTCGGCG CGCTCGACGC GCTGAAGAAG
GACGGCACGC TGAGCGCGCT GTCGCAGAAG TATTTCAAGC GCGACATCAT TGCGAAGTAA
 
Protein sequence
MNWKLSLCAA AALACAAVTA HAEPTTLRFG IEAAYPPFES KTPAGQLQGF DVDVGNAVCA 
KLNMKCVWVE NAFDGLIPAL QARKFDAINS AMNITAKRKQ SIDFTPPIYV VPIVMVAKRG
SPLKPDVASL RGKHVGVLQG SSQEDFLKAH WANAGVAVVS YQDQDQIYAD LVAGRLDAAV
QEAQTAQDGF LDKPAGRDYQ IVGEPLKDPA TLGEGTGFGL RKNDKALQAK IVGALDALKK
DGTLSALSQK YFKRDIIAK