Gene Bcen_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0362 
Symbol 
ID4091491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp403607 
End bp405046 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content71% 
IMG OID638013621 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_620247 
Protein GI107021920 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACG GGATTCACGG CGAGAAGCGC TGGTACGCGC TGATCGTGCT CTGTCTCGGC 
GTGCTGATGA TCGTGCTCGA CAGCACGATC GTGAACGTTG CGCTGCCGTC GATCAGTACC
GACCTCCACT TCACCGAAAC GGCCCTCGTC TGGGTCGTCA ACGCGTACCT GCTGACGTTC
GGCGGCTGCC TGCTGCTCGG CGGCCGGCTC GGCGACCTGT ACGGCCAGCG GCGCATGTTC
CTCGCGGGCC TCGTCGTGTT CACGCTCGCG TCGCTCGCCT GCGGCCTCGC GCAATCGCAG
GCGATGCTGA TCGCCGCGCG CGCGGTGCAG GGACTCGGCG GCGCGGTCGT GTCGGCCGTC
TCGCTGTCGC TGATCATGAA TCTCTTCACG GAACCCGGCG AACGCGCGCG TGCGATGGGC
GTCTACGGCT TCGTCTGCGC GGGCGGCGGC AGCATCGGCG TGCTGCTCGG CGGGCTGCTG
ACGAGCTCGC TGTCGTGGCA CTGGATCTTC CTCGTCAACC TGCCGATCGG CGTCGCCGTC
TATGCGATGT GCGTCGCGTT GCTGCCGCGC GTGCGTGCAC CGGCCGGCAC CGCGCGGCTC
GACGTCGCCG GCGCGATCAC GGTGACCGCA TCGCTGATGC TGGCCGTCTA CGGGATCGTC
GGCGGCAACG AGGCCGGCTG GCTGTCGACG CAGACCGTCG CACTGATCGG CGCGGCCGTC
GTGCTGCTCG CGCTGTTCAT CGCGATCGAG TCGCGTGCCG CGCATCCGCT GATGCCGCTC
ACGCTGTTCG CCGCGCGCAA CGTGGCGCTC GCGAATGCGA TCGCCGTGCT GTGGGCAGCC
GCGATGTTCG CGTGGTTCTT CCTGTCCGCG CTGTACATGC AGCGCGTGCT CGGCTATGGG
CCGCTGCAGG TCGGCCTCGC GTTCCTGCCG GCGAATTTGA TCATGGCCGC GTTCTCGCTC
GGGCTGTCGG CGCGCATCGT GATGCGTTTC GGCATCCGCG GCCCGATCGC GGCCGGCCTG
CTGCTCGCGG CGTGCGGCCT CGCGCTGTTC TCGCGCGCAC CGGTCGACGG CGGTTTCGTG
TGGCACGTGC TGCCCGGCAT GACGCTGCTC GGCATCGGCG CGGGCGTCGC GTTCAACCCG
GTGCTGCTCG CCGCGATGAA CGACGTCGAC CCGGCCGATT CCGGGCTCGC GTCAGGCATC
GTCAACACGT CGTTCATGAT GGGCGGCGCG CTCGGGCTCG CGATCCTCGC GAGTCTCGCC
GGCGCCCGCA CCGACGCGCT CGCGGCGACG CAAGCCGCGC CGCTCGACGC GCTGAACGGC
GGCTACCACG CGGCCTTCGC GTTCGGCGCG GCGTTTGCCG CCGTGGCCGC GCTGACCGGT
TTGGCGCTGC GCATCCGGGC GCCACGCGCG GTCGAAGGCG CCGGCCCCGC GATGCACTGA
 
Protein sequence
MTHGIHGEKR WYALIVLCLG VLMIVLDSTI VNVALPSIST DLHFTETALV WVVNAYLLTF 
GGCLLLGGRL GDLYGQRRMF LAGLVVFTLA SLACGLAQSQ AMLIAARAVQ GLGGAVVSAV
SLSLIMNLFT EPGERARAMG VYGFVCAGGG SIGVLLGGLL TSSLSWHWIF LVNLPIGVAV
YAMCVALLPR VRAPAGTARL DVAGAITVTA SLMLAVYGIV GGNEAGWLST QTVALIGAAV
VLLALFIAIE SRAAHPLMPL TLFAARNVAL ANAIAVLWAA AMFAWFFLSA LYMQRVLGYG
PLQVGLAFLP ANLIMAAFSL GLSARIVMRF GIRGPIAAGL LLAACGLALF SRAPVDGGFV
WHVLPGMTLL GIGAGVAFNP VLLAAMNDVD PADSGLASGI VNTSFMMGGA LGLAILASLA
GARTDALAAT QAAPLDALNG GYHAAFAFGA AFAAVAALTG LALRIRAPRA VEGAGPAMH