Gene Bcen_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0280 
SymbolmiaA 
ID4092228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp306170 
End bp307144 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content72% 
IMG OID638013540 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_620167 
Protein GI107021840 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCTT CTTCGCAGTC CCGCCCGACG ACGATCGCCT GCCTGCTCGG CCCCACCGCT 
TCGGGCAAGA CGGCCGCGGC GCTGGCGCTC GCCGCGCGCC GCCCGATCGA GATCGTCAGC 
GTCGATTCGG CGCTCGTCTA CCGCGACATG GATATCGGCA CCGCGAAACC GTCGCGCGAG 
GAGCGTGCGA GCGTGCCGCA TCACCTGATC GACATCATCG ACCCGGCGGA CGCGTATTCG 
GCCGCGGAAT TCCGCGCCGA CACGCTCCGG CTGATCGGCG AGATCGTCGC GCGGGGCCGC 
ACGCCGCTGC TCGCCGGCGG CACGATGCTG TACTACAAGG CGCTGACGCA AGGGCTCAAC 
GACTTGCCGG GCGCCGACCC GGAAGTCCGC GCGGCACTCG ACGCCGACGC CGCGCGCGAC 
GGCTGGCCCG CGCTGCACGC GCGGCTCGCG CAGGTCGACC CCGACACGGC CGCGCGGCTC 
GCGCCGAACG ATTCGCAGCG AATCCAGCGT GCACTGGAAA TCTTCATGCT GAGCGGGCAG 
CCGATGTCGG CGCTGCTCGC CGCGCCGCGC CGCACCGACG ATGCGGCCGC CGCGTACCGC 
TTCGTGCCGG TCGCGCTCGA GCCGTCGGAC CGCGCGGTGC TGCACACGCG GATCGCGCAG 
CGCTTCGACG CGATGCTCGA TGCGGGCTTC ATCGACGAAG TCGAACGGCT GCGGCGCCGC 
GACGATCTCC ATCCCGACCT GCCGTCGATG CGGTGCGTCG GCTACCGCCA GGCGTGGGAA 
TACCTCGACG GCGATACCGA CTACCGGACG ATGCGCGACA AGGGCATCTT CGCGACCCGC 
CAGCTGTGCA AGCGCCAGAT CACATGGCTG CGCGCGATGC CGGAGCGGAT CGTGGTCGAC 
TGCATCGCGC CGGATGCGAC GGCCCGCGCG CTCGACGCGC TCGAACGCGT GCTCGACGGC 
CGCACGCCGG ACTAG
 
Protein sequence
MSASSQSRPT TIACLLGPTA SGKTAAALAL AARRPIEIVS VDSALVYRDM DIGTAKPSRE 
ERASVPHHLI DIIDPADAYS AAEFRADTLR LIGEIVARGR TPLLAGGTML YYKALTQGLN 
DLPGADPEVR AALDADAARD GWPALHARLA QVDPDTAARL APNDSQRIQR ALEIFMLSGQ 
PMSALLAAPR RTDDAAAAYR FVPVALEPSD RAVLHTRIAQ RFDAMLDAGF IDEVERLRRR 
DDLHPDLPSM RCVGYRQAWE YLDGDTDYRT MRDKGIFATR QLCKRQITWL RAMPERIVVD 
CIAPDATARA LDALERVLDG RTPD