Gene Bcen_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0278 
Symbol 
ID4092226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp304277 
End bp305476 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content73% 
IMG OID638013538 
Productmajor facilitator transporter 
Protein accessionYP_620165 
Protein GI107021838 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTTGA ACCCGTCCCT GATTGCCATC CTGGCCACGG TCCTGCTCGA CGCGATCGGC 
GTCGGGATCG TGATGCCGAT CCTGCCCGGG CTGCTGCGCT CGCTCGCCGC CGCGGGCAGC
ACCGACACCC ACTACGGCAT CCTGCTCGCG CTGTACGCGT TCGCGCAGTT CCTGTGTGCG
CCGCTGCTCG GCGCGCTGAG CGACCGTTTC GGTCGCCGCC CGGTGCTGCT CGCGTCGCTG
GCCGGCGCCG CGCTCGACTA TCTGCTGATG GCGCTCGCGC CGACGCTCGC GTGGCTTTAC
GTCGGCCGGC TGATCGCGGG CATCACCGGC GCGAACGCCG CGGTCGCGAC CGCGTACGTG
ACCGACGTGA CGGCCGAGCC CGACCGTGCA CGGCGCTTCG GCCAGCTCGG CGCGATGATG
GGCATCGGCT TCATCGCCGG CCCGTTGATC GGCGGGCTGC TCGGCGTGCT GCATCTGCGT
GCGCCGTTCG TCGCGGCCGC GTTGCTCAAC GCGCTGAATC TCCTGCTCGT ATGGCGCGTG
CTGCCGGAAT CGCGGCCGCG TTCTGCCCGC GAAGGCCAGG CGGTCGGCGC GCTCAACCCG
TTCGCGAGCC TGCGCCGGCT GAGCGGCGCG CCCGCGCTCG CGCCGCTGGT CGGCATCTAC
GTGATCGTGG CGCTCGTGTC GCAGGCGCCC GCGACGCTGT GGATTCTCTA CGGCCAGGAA
CATTTCGGCT GGTCGACACC GGTCGCGGGG TTGTCGCTCG CCGGTTACGG CGCATGCCAC
GCGCTCGCGC AGGCGTTCGC GATCGGGCCG CTGATCGCGC GGCTCGGCGA GCGGCGCGCG
CTCGCGCTGG GCCTCGCGGG CGATGCGCTC GGGCTGGCGA TCATCGCGTT CGCGACCGCC
GCATGGGTGC CGTTCGCGCT GCTGCCGCTG TTCGCGGCTG GCGGCATGAC GCTGCCGGCA
TTGCAGGCGA TGCTCGCACG GCAGGTCGAC GATGCACGCC AGGGAGAACT GCAAGGCACG
CTGGCGAGCG TGGCGAGCCT GATCGGCGTC GCGGGGCCGC TGGTCGTCAC CGCGACCTAC
GCGGCGACGC GTACGACATG GCCAGGGCTC GTGTGGGCGG CGGCCGCCCT GCTGTACCTG
CTCGTGCCGC CGTTGCTGGC TGGCGCGCGC CCGGCGAACG CGCCGCGAGC GTCCGGATAA
 
Protein sequence
MLLNPSLIAI LATVLLDAIG VGIVMPILPG LLRSLAAAGS TDTHYGILLA LYAFAQFLCA 
PLLGALSDRF GRRPVLLASL AGAALDYLLM ALAPTLAWLY VGRLIAGITG ANAAVATAYV
TDVTAEPDRA RRFGQLGAMM GIGFIAGPLI GGLLGVLHLR APFVAAALLN ALNLLLVWRV
LPESRPRSAR EGQAVGALNP FASLRRLSGA PALAPLVGIY VIVALVSQAP ATLWILYGQE
HFGWSTPVAG LSLAGYGACH ALAQAFAIGP LIARLGERRA LALGLAGDAL GLAIIAFATA
AWVPFALLPL FAAGGMTLPA LQAMLARQVD DARQGELQGT LASVASLIGV AGPLVVTATY
AATRTTWPGL VWAAAALLYL LVPPLLAGAR PANAPRASG