Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0158 |
Symbol | |
ID | 4090822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 165010 |
End bp | 165783 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638013418 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_620045 |
Protein GI | 107021718 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCATG CGCTTGACCG ATTCCGCCTC GACGGCCGCC GCGCGCTGAT TACCGGTTCC GGCCGCGGGA TCGGGCTGAC GCTCGCCCGC GGGCTCGCGG AAGCGGGCGC GGCGATCGTC ATCAACGATC GCAATGAAGA GAAGGCCGCG ACGCTCGCGC GCCAGTTCCG CGACGAAGGC TTCGCGGCCG ACCATGCGGT GTTCGACGTG GCCGAGCACG CGCAGGTACG TGCGGCGATC GACGACTTCG AGACACGCGT CGGCGCGATC GACATCCTCG TGAACAACGC GGGCATCCAG CGCCGCGCGC CGCTCGACGC TTTCGACCCG GACGACTGGC ATGCACTGAT GCGCGTGAAT CTCGACGGCG TGTTCAACGT CGCGCAGGCC GTCGCGCGGC ACATGATCGC GCGCCGCCAC GGCAAGATCA TCAACGTCTG CTCGGTGCAG AGCGAACTCG CGCGGCCGAC GATCGCGCCG TATGCGGCGA CCAAGGGCGC GGTGCGGATG CTGACCAAGG GGATGTGCGC CGACTGGGCG CGTCACGGCA TCCAGGCGAA CGGCCTCGCG CCCGGCTATT TCGAAACCGA ACTGAATCGC GCGCTGGTCG ACGACGCGGC GTTTTCGGAC TGGCTGTGCA AGCGCACGCC GGCCGGTCGT TGGGGGCAGG TCGACGAGCT GTGCGGCGCG GCGATCTTCC TCGCGTCGGC CGCGTCCGAT TTCGTGAACG GCCAGACGCT GTTCGTCGAC GGCGGGCTGA CCAGTGCCGT CTAA
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Protein sequence | MTHALDRFRL DGRRALITGS GRGIGLTLAR GLAEAGAAIV INDRNEEKAA TLARQFRDEG FAADHAVFDV AEHAQVRAAI DDFETRVGAI DILVNNAGIQ RRAPLDAFDP DDWHALMRVN LDGVFNVAQA VARHMIARRH GKIINVCSVQ SELARPTIAP YAATKGAVRM LTKGMCADWA RHGIQANGLA PGYFETELNR ALVDDAAFSD WLCKRTPAGR WGQVDELCGA AIFLASAASD FVNGQTLFVD GGLTSAV
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