Gene Bcen2424_6824 details

Gene Information

• Locus tag: Bcen2424_6824
• ID: 4454881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008545
• Strand: +
• Start bp: 34106
• End bp: 38359
• Gene Length: 4254 bp
• Protein Length: 1417 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639698886
• Product: YadA domain-containing protein
• Protein accession: YP_840446
• Protein GI: 116687200

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.335586
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTT CGAAACGCCC TACACCAAGC GGTTTATCGA TCGCGATCGC CGCGGCGATC 
GCATCGATGG CTGGTCCAGT GCATGCTCAG ACGTCCGGAG ACGGTGCGCT TTCAGATGGG 
AATGGTGCCG TTGCCTCTGG CGATTATTCC GTTGCGATCG GCACGGCGGT TACCTCTGCC 
GGGCCGCGCT CGTTGAGCTT CGGTTACGCG TCGACGGCGG CCGGCGCCGA TTCGATCGTG 
CTCGGGACGT CCAGCACCGC GCAGACGAAT GCGGTAGCGG TCGGCAATAC GACGGCGGCC 
GGTACGAATG CAGCGGCAAT GGGTTTCGCC GCCACTGCTG CGGGCAATGG TTCCGTCGCG 
ATCGGAACCG GCGCCGTCGC GAACAATTCG CAGGATGTCG CAATCGGATC GGGATCCACG 
ACCGGCGCCG CGCACCCGCT AAGTAGCTTC GGTATTGCTG GTGAGAACTA CTCGGTGGCG 
GGATCAACGT CCAACGGGGT GGTGAGTTTC GGTGCGCCGC AAAGTCCGAG GCAACTGACT 
AATGTTGCCG CCGGCGCCGT TAGTGCAACA AGTCTCGACG CCGTCAACGG ATCCGAGCTC 
TATCAAATGG GACAGGCAGT TGGGAGTCTC TCTACGTCGA CGAGTCAGTC CGTGACGTCG 
CTGTCGACTG CGACCGCCAA CAATGCCACA GGAGTTGCCG CCGTCTCTTC CGGACTCGCT 
ACGCTGTCAA CCACCGCCTC ACAATCTTTG TCGTCGCTAT CGACAGGGCT CTCGAGCAAC 
ACGGCCAACG TCACGAGCCT GTCGAGCAGC GCAGCATCAA GCGTAGGTTC GCTCTCAACC 
AGCGTGGCCG GCGCCGGTAC GGCGTTGGCC AGCTTGTCGA CCGGTATTGC GCAGTCGGCC 
ACGTCACTGT CAACGGGCCT GGCAAGCAAC ACGGCCAACA TCACGAGTCT GTCGAGCAGT 
ACGGCATCAG GCTTTGGTTC GCTCTCAACT GGGCTGTCCG ACGTCGGCAC GACGGTCGCG 
AGCTTGTCGA TGAGCACGGC TGCAGGGTTC TCGTCACTGT CGACGTCGAC CGCTCAAACG 
GTCAGCAGCC TGTCAACCGG CGCGGCCAGC GCGATCGGTT CGTTATCGAC CGGGACCGCG 
CAGGCTGTCA CGTCGCTGTC AACGGGCCTG GCAAGCAACA CGGCCAACAT CACGAGTCTG 
TCGAGCAGTA CGGCATCAGG CTTTGGTTCG CTCTCAACTG GGCTGTCCGA CGTCGGCACG 
ACGGTCGCGA GCTTGTCGAC GAGCACGGCT GCAGGGTTCT CGTCACTGTC GACGTCGACC 
GCTCAAACGG TCAGCAGCCT GTCAACCGGC GCGGCCAGCG CGATCGGTTC GTTATCGACC 
GGGACCGCGC AGGCTGTCAC GTCGCTGTCG ACGGGCCTTG CAAGCAACAC GGCCAGCATC 
ACGAGCCTGT CGAGCAGCTC GGCATCGGGC TTGGGATCGC TCTCAACCGG TCTGTCCGAT 
ATCGGCACGA CGGTCGCGAG CTTGTCGACG AGCACGGCTG CAGGGCTCTC GTCACTGTCG 
ACGTCGACAG CTCAAACGAT CGGAAGTCTG TCGACAGGCA CGGCCAGCGC GATTGCGACG 
TTGTCGACTA CGACAAGCCG ATCGATCTCG TCTCTTTCGA CTGGTCTGGC TGACGACGGC 
GCGACACTCT CGGCAATGCA GTCCGGTCTG GCTGCAGGGA CCGTTGGTCT GGTTCAGCAA 
GCAGGCGGTG CCGGCGCGGG CGCGATCACG ATTGGCGCCG GTACCGGCGG TACGGTGCTC 
AACGTCGCCG GCAACGCGGG CGCGCGGCAG GTTAAGGGTG TGGCTGCAGG CACAGACGCT 
ACCGACGCGG TCGACCTGCA GCAGCTGCAG AGCGTGGCGG GCCAGACGGG CGCGATCGGC 
GCGAGCGCAG TTAGCTATGA CGACGCGTCG CATACCCGCG TCACGCTCGG TGCATCAAGT 
TCGCCGGTGA CCCTGACCAA CCTCGCGGAC GCGTCGTTGA ACGCGAGCAG CACCGACGCT 
GTGACGGGGC GGCAGCTCTA TGCTGCCCAG CAGGCGACGA ACGCAAACGT CGGCGCGATC 
GCTGCCCTGT CGACGTCAAC GCTGGCGGCA GCGTCCTCGC TTTCCACGGG CATCGCCAGC 
AACGTCGTCT CGATCGCGAG CCTGTCGACT AGCACGACCA CGGCGCTTTC TTCCCTCTCG 
ACCGGCGTCT CCCATGGCCT GGCATCGCTG TCGACCGGCT TATCGTCGGC CAACGTCGGC 
GTATCAGCCA TCGCGACCAG TCTTGCGAAC GGGACAGTCG GGCTGGTTCA GCAGTCCGGC 
GGTGCCGGCA ACGACACGAT TACGATCGGC GCCAGCACCG GCGGCACCGC GCTCGACGTC 
GACGGAACTG CGGGCGCGCG GCAGATCAAG GGCGTAGCCG CCGGCACGAG CGCCACCGAT 
GCAGTCAACC TCCAGCAACT GCAGGGCGTA ACGGCCGCTG TGGGTGCCGT GGGCGCCGGC 
GCAGTCTCCT ATGATGACCC GATGCATTCG CGCGTCACGC TTGGCGCCTC CGCAGGATCG 
CCCGTCCTGC TCACCAACGT CGCAGACGCG GCACTGACGG CCACCAGCAC GGACGCGGTG 
TCTGGTCGGC AGCTCTACAC CGCCAACCAG GCGATCAGCG CCAACGCGGT CTCGATCGCA 
ACGCTGTCAA CGTCGACGGG CTTCGCCGTG GCCTCGTTGT CCACCAGCGT CGCCAACGGC 
GGGGCGACGA TTGCCGCGCT TCAGTCTGGA CTGACGGCCG GCACGATTGG CCTGGTGCAG 
CAAGCCGGCG GTGCCGGCAC CGGCACGATT ACGATCGGCG CCGGCACCGG TGGCACCGCG 
CTCGACGTCG CCGGCACCGC GGGCGCGCGC CAGATCAAAG GCGTGGCCGC CGGCACGGAC 
GCCACCGATG CGATCAACCT CCAGCAGCTG CAGGGCGTGG CGTCTCAGGC CGGGGCGCTC 
GGCGCGAGCG CGGTCGTCTA CGACGATGCC TCGCATACGC GCGTCACCTT CGGCGCGGCA 
GGTGCGCCCG TCACCCTGAC CAACGTCGCT GATGCGGCCT TGACGGCGAG CAGCACCGAC 
GCGGTCTCGG GCCGGCAACT GTATGCGACG AACCAGAGCG TCTCCGCCCT GGCTGGCCAG 
CTCGCAACGG GTACCGTCGG GCTCGTGCAG CAACACGGCG GCTCGAGCGC CGGCGCCATT 
ACGATCGGTG CCGGCACCGG CGGCACCAAC ATCGACGTCA GCGGCCTGGC TGGCGCGCGC 
CGCATCTCCG GCGTGGCAGC GGGTGTGAAC GCCACCGACG CGGTCAATGT CGGCCAGTTG 
AACCAGGTTA TCGGTACGGT CAATACGATC GCCGGTAACG CACTGTCTTA CGACGATCCC 
ACGAAGCTCA GCGTGACGCT TGGAGGGCTC GGAGCCGGGG CGGCCGTCAC CATCCATAAC 
CTGGCGCCCG GCGCGTTATT AGCAACCAGC GCGGATGCGG TCAACGGGGC TCAGCTCTTT 
GCCACGAATG CGAACGTCGC CGCCAATACC AGCGCGATTG ATGCACTTTC TGCCCGACTT 
GGCGCGATCC TTCCGTCGAG GTTCAGCCAG AGCCTCCCCG AGCCCGGCCA GGGCAGCCTC 
AAATATGCTG CGTTCAACAG CACCGGCGCC GGTGCAGTTG CAACCGGCGC GGATGCGACA 
GCTATCGGCA GCAATGCGGT GGCCACCGGC GATCGCAGTG TTGCACTTGG TGTGGGTGCC 
GTTGCCCAAG GCACCGGCTC GATCGCGGTC GGCAGCGGTG CGAGCACAAC TGGCGCCAAT 
GCCGTGGCGC TGGGCGCCGG TTCAGTGGCC GATCGCGACG ATTCGGTGTC GATCGGCAAC 
TCGGCGACCG GTACGACGCG AACACTGGCC AATGTCTCGG CCGGAACGGC CCCGACCGAT 
GCCGTCAACG TCCAGCAGCT GAACGACTCG GTGACGAACC TGAGCAACCG CATCGAACAC 
GACCGACGTG ACGCCAATGG CGGCATCGCC GCGGCTGTCG CGATCGCTAG TCTGCCCCAG 
GCGCCGGCGC CAGGAAAGAG CATGGTGGCC ATCGGGGGCG GGACGTACGG CGGGCAGTCC 
GCCATGGCGC TCGGCATTTC AACGTATGCC GGCCACTGGA TTCTGAAGGC GAACGGCTCG 
ACCGATACGC GCGGCACCGT GGCCGCCGGC GTAGGTGCTG GATTCGTCTG GTAA 

 

Protein sequence

MKFSKRPTPS GLSIAIAAAI ASMAGPVHAQ TSGDGALSDG NGAVASGDYS VAIGTAVTSA 
GPRSLSFGYA STAAGADSIV LGTSSTAQTN AVAVGNTTAA GTNAAAMGFA ATAAGNGSVA 
IGTGAVANNS QDVAIGSGST TGAAHPLSSF GIAGENYSVA GSTSNGVVSF GAPQSPRQLT 
NVAAGAVSAT SLDAVNGSEL YQMGQAVGSL STSTSQSVTS LSTATANNAT GVAAVSSGLA 
TLSTTASQSL SSLSTGLSSN TANVTSLSSS AASSVGSLST SVAGAGTALA SLSTGIAQSA 
TSLSTGLASN TANITSLSSS TASGFGSLST GLSDVGTTVA SLSMSTAAGF SSLSTSTAQT 
VSSLSTGAAS AIGSLSTGTA QAVTSLSTGL ASNTANITSL SSSTASGFGS LSTGLSDVGT 
TVASLSTSTA AGFSSLSTST AQTVSSLSTG AASAIGSLST GTAQAVTSLS TGLASNTASI 
TSLSSSSASG LGSLSTGLSD IGTTVASLST STAAGLSSLS TSTAQTIGSL STGTASAIAT 
LSTTTSRSIS SLSTGLADDG ATLSAMQSGL AAGTVGLVQQ AGGAGAGAIT IGAGTGGTVL 
NVAGNAGARQ VKGVAAGTDA TDAVDLQQLQ SVAGQTGAIG ASAVSYDDAS HTRVTLGASS 
SPVTLTNLAD ASLNASSTDA VTGRQLYAAQ QATNANVGAI AALSTSTLAA ASSLSTGIAS 
NVVSIASLST STTTALSSLS TGVSHGLASL STGLSSANVG VSAIATSLAN GTVGLVQQSG 
GAGNDTITIG ASTGGTALDV DGTAGARQIK GVAAGTSATD AVNLQQLQGV TAAVGAVGAG 
AVSYDDPMHS RVTLGASAGS PVLLTNVADA ALTATSTDAV SGRQLYTANQ AISANAVSIA 
TLSTSTGFAV ASLSTSVANG GATIAALQSG LTAGTIGLVQ QAGGAGTGTI TIGAGTGGTA 
LDVAGTAGAR QIKGVAAGTD ATDAINLQQL QGVASQAGAL GASAVVYDDA SHTRVTFGAA 
GAPVTLTNVA DAALTASSTD AVSGRQLYAT NQSVSALAGQ LATGTVGLVQ QHGGSSAGAI 
TIGAGTGGTN IDVSGLAGAR RISGVAAGVN ATDAVNVGQL NQVIGTVNTI AGNALSYDDP 
TKLSVTLGGL GAGAAVTIHN LAPGALLATS ADAVNGAQLF ATNANVAANT SAIDALSARL 
GAILPSRFSQ SLPEPGQGSL KYAAFNSTGA GAVATGADAT AIGSNAVATG DRSVALGVGA 
VAQGTGSIAV GSGASTTGAN AVALGAGSVA DRDDSVSIGN SATGTTRTLA NVSAGTAPTD 
AVNVQQLNDS VTNLSNRIEH DRRDANGGIA AAVAIASLPQ APAPGKSMVA IGGGTYGGQS 
AMALGISTYA GHWILKANGS TDTRGTVAAG VGAGFVW