| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6780 |
|---|
| Symbol | |
|---|
| ID | 4454673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 1047656 |
|---|
| End bp | 1048099 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639698842 |
|---|
| Product | TadE family protein |
|---|
| Protein accession | YP_840402 |
|---|
| Protein GI | 116687155 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0136653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.216151 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC GCCATTTTCC ACTGTCACGC CGGCGCGCGC AGCGCGGCGT GGCGATCGTC
GAATTCGCGC TGATCGCGTC GGTGCTGATC ATGCTGCTGA TCGGCATCTT CGAGTTCGGC
CGCGTGCTGT TCTACTGGAA CACCGCGAGC GAGGCCGTGC GCCTCGGCGC GCGCACCGCG
GTGGTTTGCG ACGTGAACGC CGCGGGTGTC GTGAAACGCG TGCGATCGCT GCTGCCGCTG
CTGTCGAGCG CGAACGTGTC GGTCAACTAC ACGCCGTCGA GCTGCGACGT GAACACGTGC
TCGTTCGTGA CGGTGAGCGT CACGAACGTC ACCGTCAAGA CCATGATCCC GTTCATGAAC
GTCACGGTCA GGATGCCGCC GTTCACGACG ACGCTGCCGC GCGAAAGCCT GAATTCCGCG
ACGGGCGGTT CCGCCTGCAA CTAA
|
|---|
| Protein sequence | MNARHFPLSR RRAQRGVAIV EFALIASVLI MLLIGIFEFG RVLFYWNTAS EAVRLGARTA
VVCDVNAAGV VKRVRSLLPL LSSANVSVNY TPSSCDVNTC SFVTVSVTNV TVKTMIPFMN
VTVRMPPFTT TLPRESLNSA TGGSACN
|
|---|
| |