| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6778 |
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| Symbol | |
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| ID | 4454671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 1045042 |
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| End bp | 1046406 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639698840 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_840400 |
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| Protein GI | 116687153 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.367997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.399772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTGC GCGAACAGAT GTCCTTGCAC CGGGCCCAGC CGCTGGCGGC CAGTGACGCG
GCCGGCCCGG CGCATTCGTC GGTGCGCGAC GCATACCAGA AGCTGCGCCG CGAAATTCAT
CTGGCGGTGC TCGAGCGCGT CGAGCTCGAG CGCCTGTCCC GGCTGCATCA GGATCAGATC
CGCATGGAAA TCGGCGCGCT GATCGCGCGC ATCCTCGACG AGGAGCGGCT GCCGGCGAAC
GACATCGAGC GGCGCCAGCT CGCGATCGAC GTGTACGACG AGATGTTCGG CTTCGGCCCG
CTCGAAGCGC TGCTGCGCGA CCCCGGCATT TCCGACATCC TCGTGAACAC GTACCGGCAG
GTCTACGTCG AGCGCTGCGG CCAGCTCGAA CTGACCGACG TGACGTTCTA CGACGACGCG
CACCTGATGA AGGTGATCGA GAAGATCGTG TCGCGCGTCG GGCGCCGCAT CGACGAATCG
AGCCCGATGG TCGACGCCCG GCTGCCGGAC GGTTCGCGCG TGAACGCGAT CATCCCGCCG
TCCGCGATCG ACGGGCCGCT GATGTCGATC CGGCGCTTCG CGGTCAACCC GCTGAAGATG
GACGACCTGG TGCGCTACCA CAGCCTGACG CCGCCGATGG CCGAGCTGCT CGACGCGCTG
TCGCGCGCGA AGGTGAACGT GCTGGTGTCG GGCGGCACCG GCAGCGGCAA GACGACGCTG
CTCAACATCC TGTCCGGCTT CATTCCGCGC AACGAGCGGA TCGTGACGAT CGAGGACGCC
GCCGAGCTAC AACTGCAGCA GCCGCACGTG CTGCGGCTCG AGACGCGCCC GCCGAACATC
GAGGGCAAGG GCGAGATCAC GCAGCGCACG CTGGTGCGCA ACGCGCTGCG GATGCGCCCG
GACCGCATCA TCCTCGGCGA AGTGCGCGGC GCCGAAGCGC TCGACATGCT CAACGCGATG
AACACCGGCC ACGAAGGCTC GCTCGCGACG ATCCACGCGA ATACGCCGCG CGACGCGCTG
ACGCGCCTCG AGAACATGGT CAGCGTGTCC GGCCTGACGC TGCCGCCGAA GACGATGCGC
CAGCAGATCG CGTCGGCGAT CTCGGTGGTC GTGCAGGCGG CGCGCCTGAC CGATGGCAAG
CGCAAGATCG TCAGCATCCA GGAGCTGACC GGGATGGAAG GCGACATCAT CAACATGCAG
GAGATCTTCA CGTTCAAGCG CACGGGCGTG GACCGCGACG GCGCGGTGCG CGGCCACTTC
TGCGCGACCG GCGTGCGGCC GAAGTTCGCC GAGCGGCTGC AAGCGTTCGG CATCAACCTG
CCGGATTCGC TGTACGACCC GTCCGTGCAT TACGAGACGG ACTGA
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| Protein sequence | MSLREQMSLH RAQPLAASDA AGPAHSSVRD AYQKLRREIH LAVLERVELE RLSRLHQDQI
RMEIGALIAR ILDEERLPAN DIERRQLAID VYDEMFGFGP LEALLRDPGI SDILVNTYRQ
VYVERCGQLE LTDVTFYDDA HLMKVIEKIV SRVGRRIDES SPMVDARLPD GSRVNAIIPP
SAIDGPLMSI RRFAVNPLKM DDLVRYHSLT PPMAELLDAL SRAKVNVLVS GGTGSGKTTL
LNILSGFIPR NERIVTIEDA AELQLQQPHV LRLETRPPNI EGKGEITQRT LVRNALRMRP
DRIILGEVRG AEALDMLNAM NTGHEGSLAT IHANTPRDAL TRLENMVSVS GLTLPPKTMR
QQIASAISVV VQAARLTDGK RKIVSIQELT GMEGDIINMQ EIFTFKRTGV DRDGAVRGHF
CATGVRPKFA ERLQAFGINL PDSLYDPSVH YETD
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