Gene Bcen2424_6704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6704 
Symbol 
ID4453962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp940476 
End bp941513 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content67% 
IMG OID639698766 
Productalcohol dehydrogenase 
Protein accessionYP_840326 
Protein GI116687079 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.710863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.158251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGA ACGAAAGGAA AACCGACATG CTCAGCGTGA TCTGCGAATC CCCCGGCGTG 
CTGCGCGTGC AGCAGCGCGA ACTGCCCGTG CGCGGCAGCG GCGAAGTGCT GTTGCGCGTG
CAACGGGTCG GCATCTGCGG CACCGACCTG CACATCTTCA CCGGCAACCA GCCGTACCTC
GACTATCCGC GCGTGATGGG GCACGAGCTT TCCGCGGTCG TCGTCGAGGC GGAACCGGAG
TCGGGTCTCG GCGTGGGCGA CGCGGTGTAC GTGATGCCGT ATCTGTCGTG CGGACACTGC
GTCGCCTGCC GCCACGGCAA CACGAACTGC TGCGTCAACA TCAAGGTGCT CGGCGTGCAT
CGCGACGGCG CGCTCGCCGA ATACCTGAGC GTGCCCGCGC AGTTCGTTCA CAAGGCCGAC
GGCATTTCGC TCGACCAGGC GGCGATGCTG GAATTCCTTG CGATCGGCGC GCATGCGGTG
CGGCGCGCGG ACGTCCGTGC CGGACAGCGG GCGCTGATTG TCGGCGCCGG GCCGATCGGC
ATGGCGGCGA TGATCTTCGC GAAGCTGCGC GGCGCCGACG TCACATGCCT CGACACGCGG
GCGGATCGGC TCGCGTTTTG CCGGCAGCAT CTCACGGTCG ATGCGACGGT GGAGGTGGGG
GAAGACGACG CAGCGCGTCT CGCGTCGTTG ACGAACGGCG AGTATTTCGA TGCGGTATTC
GACGCGACCG GCAACCTCGA TGCGATGAAT CGCGGTTTCG AGTTCGTCGC GCACGGCGGC
AAGTACACGT TGATCTCGAT CGTGCGCGGG CATGTCGCGT TTTCGGACCC GGAATTCCAC
AAGCGGGAAA CCACGCTGCT CGCGAGCCGC AATGCGACCG CCGAGGATTT CGCGACAGTG
CTCGACGCGA TGCGTGCGGG GCGCATTCCG GACCGCGCGC TGAACACGCA CCGGATGCGG
CTCGAGGAGG TGCCGGATGC GCTGCCGCGC CTGCTGGAGG CGGGGCAGAC CGTCGTGAAG
GCGCTCGTCG AATGCTGA
 
Protein sequence
MKPNERKTDM LSVICESPGV LRVQQRELPV RGSGEVLLRV QRVGICGTDL HIFTGNQPYL 
DYPRVMGHEL SAVVVEAEPE SGLGVGDAVY VMPYLSCGHC VACRHGNTNC CVNIKVLGVH
RDGALAEYLS VPAQFVHKAD GISLDQAAML EFLAIGAHAV RRADVRAGQR ALIVGAGPIG
MAAMIFAKLR GADVTCLDTR ADRLAFCRQH LTVDATVEVG EDDAARLASL TNGEYFDAVF
DATGNLDAMN RGFEFVAHGG KYTLISIVRG HVAFSDPEFH KRETTLLASR NATAEDFATV
LDAMRAGRIP DRALNTHRMR LEEVPDALPR LLEAGQTVVK ALVEC