| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6678 |
|---|
| Symbol | |
|---|
| ID | 4453988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 908053 |
|---|
| End bp | 909006 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639698740 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_840300 |
|---|
| Protein GI | 116687053 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.367401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAA TTCTCATCGG GCTGATCGGC CGGCGCATCG CGGTCACCGC GCTGACGCTG
CTGATCGTGT CCGCGATCAT CTTCACGATC ACGAACCTGC TGCCGGGCGA CGCCGCGCAG
GCCGCGCTCG GCCAGTCCGC GACGCCGGAG ACGGTCGCCG CGCTGCGCCA GCAGTTCGGT
CTCGACATGC CGGCGCACGT GCGCTACCTG CACTGGCTCG CCGGGCTGCT GCACGGCGAC
TTCGGCCGGT CGTTTTCCGG CGACATGCCG GTGTCGGAGC TGATCGGCGG GCGCCTGCCG
AAGTCGCTCG CGCTGGCGGC GATCACGACC GCCGTGTCGG TGCCGATCGC GCTGCTGCTC
GGCATCCTCG CGGCGGTCAA GCGCGAGTCG GTGGTCGACC GCGTGATCAG CCTCGGCACG
CTGTCGCTCG TCGCGACGCC GGAATTCCTG ATCGCGACGG TCGCCGTGCT CGTGTTCGCG
GTGAAGCTGC ACTGGCTGTC CGCGCTGTCG TACAGCGGCC CGATCGAAAG CCTGCACGAT
TTCCTGCGTG CGTATGCGAT GCCGGTGCTG ACGCTGTGCG CGGTCGTGAT CGCGCAGATG
GCGCGGATGA CGCGCGCCGC GGTGATCGAG CAATTGAGCG CGTCGTACGT CGAGATGGCC
ACGTTGAAGG GCGCGAGCCC CGCGCGCGTC GTGCTACGCC ATGCGTTGCC CAACGCGATC
GGCCCGATCG CCAACGCGAT CGCGCTGAGC CTGTCGTATC TGCTCGGCGG CGTGATCGTC
GTCGAGACGA TCTTCAACTA TCCGGGCCTC GCGAGCCTGA TGGTCGATGC CGTCAGCAAT
CGCGATTTCC CGTTGGTCCA GGCGTGCACG CTGATCTTCT GCGTCGCTTA CCTGACGCTC
GTGCTGTTCG CCGACCTGTG CTCGATCGTG TCGAACCCGC GACTGCGCAC CTGA
|
|---|
| Protein sequence | MNRILIGLIG RRIAVTALTL LIVSAIIFTI TNLLPGDAAQ AALGQSATPE TVAALRQQFG
LDMPAHVRYL HWLAGLLHGD FGRSFSGDMP VSELIGGRLP KSLALAAITT AVSVPIALLL
GILAAVKRES VVDRVISLGT LSLVATPEFL IATVAVLVFA VKLHWLSALS YSGPIESLHD
FLRAYAMPVL TLCAVVIAQM ARMTRAAVIE QLSASYVEMA TLKGASPARV VLRHALPNAI
GPIANAIALS LSYLLGGVIV VETIFNYPGL ASLMVDAVSN RDFPLVQACT LIFCVAYLTL
VLFADLCSIV SNPRLRT
|
|---|
| |