Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6620 |
Symbol | |
ID | 4454772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 847563 |
End bp | 849608 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639698682 |
Product | transketolase |
Protein accession | YP_840242 |
Protein GI | 116686995 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.52083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATC CCACCGCACA TTCCCGCACG ACCGCCAAAG CGGTGCCGCC CCCGCGAGAC CCGCATCTGC GCGCGCTGGC GAACTGTATT CGCTTCCTTG CAATGGATGC AGTACAGAAT GCCAACAGCG GCCATCCTGG TGCGCCAATG GGGCTGGCCG ACGTTGCGAC GGTGCTGTTC AAGGAGTTCA TGCAATTTGA TGCATCCGCC CCCCACTGGA TCGATCGGGA CCGGTTGGTC CTTTCCAACG GACACGCATC GATGCTCCTC TACAGCTTGC TCTATCTCAC GGGCTATGCC GACATGACCC TCGACGAGCT CAAGCGCTTC CGGCAAGTCG GCAGCAAGAC GCCAGGTCAT CCCGAGTACT CGCACGCCGA TGGAATCGAA CTGACGACCG GTCCCCTCGG ACAAGGCATC GCGGAATCCG TCGGCATGGC GTTGGCCGAG CGCGTCATGA ATGCGCACTT CGGCGATGAC CTCGTCGATC ACTACACATA CGTATTTCTC GGCGACGGTT GCCTGATGGA AGGCATCAGC CACGAGGCCA TTTCGTTGGC CGGCCACCTC CGGTTGGGCA AACTGATCGC GTTCTGGGAC AACAATTCGA TTTCCATCGA CGGTCCCACC CAGCTCGCGG TCTCGGACAA CGAGATCGAG CGCTTTCACT CGGCTGGGTG GCACGTCCTG GAAATCGACG GTCACGATAC GGACGCGATA CGGCGCGCGA TCGAGACCGC CAGGACAACG CATGACAGAC CGACGTTGAT CGCATGCAGG ACGATCATCG GGTTCGGCTT TCCGACGAAG GCTGGCACCG AGAAAGCCCA TAGCGATGCG CCGGGCGAGG ATGAAATCGC GGGCGCACGC CAGACCCTCG ATTGGCATTC GCCGCCGTTC GAAATCCCGG ATGACCTGCT GAAAGCATGG CGGGAGATCG GGGCGCGCGG CCGCAAGGCA AGACTCGCGT GGGATGAGCG TGTCAGCCGG GCGCCGCACG CGCTGCGTAC CGAATTCGAC CGACGTAATG CCGGAAAGCT TCCGGATGAC TGGAAGACGG CGATTGCGGC GGCACGGCAG GCGTTTGTTG CCGCAGGCAG TGCAATGGCC ACCCGCAAGG CCAGCGGTGA AGTGCTTGAT CAACTCTCCG ATGCGATTCC GGAATTGCTG GGCGGCTCGG CGGATCTTAC GCAGTCCAAT AATACGAAGA CGAAGAACCA GATCGCGATC GAGCCCGGGC AGTTCAAGGG TTCATATGTC CACTACGGCG TCCGCGAACA CGGCATGGCC GCCGCCATGA ACGGCATTGC CCTTCACGGC GGCCTCATTC CGTACGGTGG CACCTTTCTT TGTTTTTCGG ACTACTGCCG TCCGGCGATC CGCTTGAGCG CGATGATGCG GGTGCGCGCC ATCTTCGTGA TGACGCACGA TTCCATCGGT CTCGGAGAAG ATGGCCCGAC GCATCAACCC GTCGAGCACC TTGCCGCCCT TCGGGCCATT CCCCAACTCG CCGTCTATCG GCCGGCCGAT CCAGTCGAAA CGGCAGAGTG CTGGGAGCTG ATTCTCGAAC AGCCCCGCAG GGCTGCGCTG CTCGCATTGT CACGACAGCC GGTCCCGCTC CTGCGCAACG AGCCCGGAAA CGAAAACAAG TCGGCGCGCG GCGCCTATGT CTTGCGGGAG GCCGATGGCG GGCCGCGCCG ACTCACCCTG CTCGCGACAG GCTCGGAGGT CGACCTCGCC GTCCAGGCAC GCGACATCCT GCAGCAGGAA GGCGTGCCGA CGGCCGTCGT ATCGATGCCG TGCCGCCTGC TCTTCGAGGA GCAACCACGC GATTACCAGC GGGCCGTGCT GGGCACTTCT CCCGCGAGAG TCGCGGTCGA GGCGGCGGTC GAACTGGGAT GGGAGCGGTA CCTCGGACCG GAAGGCCGGT TCGTCGGCAT GCACAGCTTC GGCGAGTCGG GAAAAATCAA GGACGTGTAC AAAAAATTCG ACATCACGGT CGATGCGGTC GTTCGAGCGG CGCGTCAGGT GCTGTCCGAA GTGTGA
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Protein sequence | MSDPTAHSRT TAKAVPPPRD PHLRALANCI RFLAMDAVQN ANSGHPGAPM GLADVATVLF KEFMQFDASA PHWIDRDRLV LSNGHASMLL YSLLYLTGYA DMTLDELKRF RQVGSKTPGH PEYSHADGIE LTTGPLGQGI AESVGMALAE RVMNAHFGDD LVDHYTYVFL GDGCLMEGIS HEAISLAGHL RLGKLIAFWD NNSISIDGPT QLAVSDNEIE RFHSAGWHVL EIDGHDTDAI RRAIETARTT HDRPTLIACR TIIGFGFPTK AGTEKAHSDA PGEDEIAGAR QTLDWHSPPF EIPDDLLKAW REIGARGRKA RLAWDERVSR APHALRTEFD RRNAGKLPDD WKTAIAAARQ AFVAAGSAMA TRKASGEVLD QLSDAIPELL GGSADLTQSN NTKTKNQIAI EPGQFKGSYV HYGVREHGMA AAMNGIALHG GLIPYGGTFL CFSDYCRPAI RLSAMMRVRA IFVMTHDSIG LGEDGPTHQP VEHLAALRAI PQLAVYRPAD PVETAECWEL ILEQPRRAAL LALSRQPVPL LRNEPGNENK SARGAYVLRE ADGGPRRLTL LATGSEVDLA VQARDILQQE GVPTAVVSMP CRLLFEEQPR DYQRAVLGTS PARVAVEAAV ELGWERYLGP EGRFVGMHSF GESGKIKDVY KKFDITVDAV VRAARQVLSE V
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