Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6496 |
Symbol | |
ID | 4454649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 711413 |
End bp | 713530 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639698559 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_840119 |
Protein GI | 116686872 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0828061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACCG CCCTGCCCGA CCGTCTCGAA CCCGGCCGCA GCTATCCGCT CGGCGCCAGT TGGGACGGCC TCGGGACCAA CTTCGCGGTA TTTTCCGCGC ACGCGCAGCG CATCCAGCTG TGCGTGTTCG ACCCGACCGG CCGCAAGGAA CTCGCGCGCC TCGACCTGCC CGAATGCACC GACGAGGTGT GGCACGGCTA CCTGCCCAAC GCGCATCCGG GCACCGTGTA CGGGTTCCGC GCGGACGGCC CGTACCAGCC GCAGCACGGC CATCGCTTCA ATCCGACCAA GCTGCTGCTC GACCCGTACG CGCGCAAGCT GGTCGGCCAG TTCCGCTGGT CGGACGCACT GTTCGGCTAT CGCGTGCATT CGAACCGGGC CGACCTGTCG ATGGACCGCC GCGATTCGGC CCCCGCGATG CCGAAAGCGG TGGTCGTCGA CGAAGCGTTC GACTGGAGCA ACGACCGCCG CCCGAACGTG CCGTGGCGCA GCACCGTGAT CTACGAGACC CACGTGCGCG GCGCGTCGAT GCGCCGCGCC GGGCTGCGCC CGCCGGAGCG CGGCACGTTC GCGTCGCTCG CGCATCCGGC GTTCATCGAT CACCTGCTGT CGATCGGCGT GACGACGGTC GAGCTGCTGC CGATTCACGC GTTCCTGCAG CAGCGCGAAC TCGTGAAACG CGGGCTGCGC AATTACTGGG GCTACGACAC GGCCGCGTTC TTCGCGCCGG AGCCGTCGTA CCTGACGACG CGGCGGCTCG ACGAAATGCG CATCGCGGTG CGCCAGCTGC ATGCGGCCGG CATCGAGGTC GTGCTCGACG TGGTCTACAA CCACACGTGC GAAGGCAACC AGCTCGGGCC CACGCTGTCG TGGCGCGGCC TCGACAACGC GAGCTATTAC CGGCTGCGGC CCGACGATCC GCGCTACCAC GTCGACGAAA CCGGCTGCGG CAACACGCTG AACATGTCGC ATCCGCGCGT CGTGCAGATG GTGATGGATT CGCTGCGCTA CTGGGCGACC GCGTTCAACA TCGACGGCTT CCGCTTCGAT CTCGGCGTGA CGCTCGGCCG CGAGGATCAC GGCTTCGAGC CCGGCGCCGG GTTCTTCGAT GCGCTGCGGC AGGACCCCGT GCTCGCGCAG CGCAAGCTGA TCACCGAGCC GTGGGATCTC GGCCCCGGCG GCTATCAGCT CGGCCGCCAC CCGCCCGGCT TCGCCGAATG GAACGACCGG TTTCGCGACA CCGTGCGGCG TTTCTGGCGC GGCGACGCGG GGCAGCGCCC GGAACTGGCC GCGCGGCTGT CGGGCTCGGC CGACCTGTTC AATCACGGGC GGCGCCGCAC GTGGGCCTCG ATCAATTTCG TGACCGCGCA CGACGGCTTC ACGCTGGCCG ACCTCGTGGC GTATGCGGGC AAGCACAACG ACGCGAACGG CGAGGACAAC CGCGACGGCC GCGACGACAA CTGCAGCGCG AACTGGGGCG TCGAAGGGCC GACCGACGAC ACGGCGATCC GCGACGTGCG GCTGCGCGTC GCCCGCTCGA TGCTCGCGAC GCTGTTTACC GCGCTCGGCA CGCCGATGCT CGTGGCCGGC GACGAATTCG GCCGCACGCA GCACGGCAAC AACAACGCGT ATTGCCAGGA TAACGAACTG TCGTGGCTCG ACTGGGATCT CGCGCACAGC GACGCCGGCG TGCAGATGAC CCGCTTCGTG TCGCGGCTCG CCGCGCTGCG GCGCATGTAT CCGGTGATGT CGGCGCCGCG CTACCCGTCG GGCGACCGCG ACGGCGCGCC GGGCATGCGC GAGATCGACT GGTTCGACGA ACGCGGCGAC GCGCTCACCG TGCCCGCCTG GGAAGACGGC GAACGCCGCG CATTGACGAT GCGGCGCGTC GGCACCGGCC GCACCGGGCG CACCGAAGCG TTGCTCGTGA TGCTGAACGC ATCGGCCGAC ACCATCACGT TCATACCGCC CGCGCCCGTG CTCGATTACC GCATCCTGCT CGACACTGCG ACGCCCGACT CGGGCCCGCG CTCGTGGCCG GAAGCGGGGC TCGACGTCGC CGCGCATGCG GCCGTGATCG CGGTCGCGGC CGTGCCGCCG CCAGATCAGT CTTCCTGA
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Protein sequence | MPTALPDRLE PGRSYPLGAS WDGLGTNFAV FSAHAQRIQL CVFDPTGRKE LARLDLPECT DEVWHGYLPN AHPGTVYGFR ADGPYQPQHG HRFNPTKLLL DPYARKLVGQ FRWSDALFGY RVHSNRADLS MDRRDSAPAM PKAVVVDEAF DWSNDRRPNV PWRSTVIYET HVRGASMRRA GLRPPERGTF ASLAHPAFID HLLSIGVTTV ELLPIHAFLQ QRELVKRGLR NYWGYDTAAF FAPEPSYLTT RRLDEMRIAV RQLHAAGIEV VLDVVYNHTC EGNQLGPTLS WRGLDNASYY RLRPDDPRYH VDETGCGNTL NMSHPRVVQM VMDSLRYWAT AFNIDGFRFD LGVTLGREDH GFEPGAGFFD ALRQDPVLAQ RKLITEPWDL GPGGYQLGRH PPGFAEWNDR FRDTVRRFWR GDAGQRPELA ARLSGSADLF NHGRRRTWAS INFVTAHDGF TLADLVAYAG KHNDANGEDN RDGRDDNCSA NWGVEGPTDD TAIRDVRLRV ARSMLATLFT ALGTPMLVAG DEFGRTQHGN NNAYCQDNEL SWLDWDLAHS DAGVQMTRFV SRLAALRRMY PVMSAPRYPS GDRDGAPGMR EIDWFDERGD ALTVPAWEDG ERRALTMRRV GTGRTGRTEA LLVMLNASAD TITFIPPAPV LDYRILLDTA TPDSGPRSWP EAGLDVAAHA AVIAVAAVPP PDQSS
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