Gene Bcen2424_6482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6482 
Symbol 
ID4454251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp694369 
End bp695388 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content69% 
IMG OID639698545 
ProductKu domain-containing protein 
Protein accessionYP_840105 
Protein GI116686858 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.193734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCGC GGATGATTTG GAAAGGCGCG ATCAGCTTCG GGCTCGTGCA CGTGCCCGTG 
CAGTTGTTTC CGGCGACGCG CACCGTGAAA CCGTCGTTCC GGATGCTCGA CAAGCGCTCG
ATGGACCCGA TCGGCTATCG GCAGATCAAC AAGCGCACCG GCAAGGAGGT CACGCGCGAG
GACATCGTGC GCGGCTACGA ATACGAGAAG GAGCGCTACG TCGTGCTCAC CGACGACGAG
ATCCGCGCGG CGAACCCGGA ATCGACGCAG ACCGTCGACA TCCTGACCTT CGTCGACGAG
GACGCCGTGT CGTTCCTCTA TCTCGACACG CCGTACTACC TGGTGCCGGA CCGCAAGGGC
GAGAAGGTCT ATGCGCTGCT GCGCGACGCG CTGAAGGACA GCGGCAAGAT CGGCATCGCG
CTGGTGGTGA TGCGCGACCG CCAGCACCTT GGCGCGCTGA TCCCGGTCGG GCCGATGCTC
GCCCTCGATA CGCTGCGCTG GCAGGAGGAA CTGCGGCCGC TCGACGAGCT GTCGGTGCCG
GCCGACGACG CGAAGGGCGC GGGCGTCACC GCGCGCGAGC TCGGGATGGC GAAGAAGCTG
ATCGACGACA TGTCCGGCAA ATGGACCCCC GACGAATATC ACGACACGTT CCGCGACGAC
ATCCTCGAGC TGGTCGAGCG CAAGGTGCGC GCGGGCAAGA TCGAGGAGAT CGAGGACCGG
CCCGCGCAGA CCGGCCGCGC GGCGAGCAAC GTGGTCGATC TCACCGAGCT GCTGAAGCGC
AGCCTGAAGG GCGGCGCGGG GGCGCGCGCG GCGGATCTGC GTGCAGAGCG TGGCGAAGGG
GAGGACGAGG CGTCTTCATC GTCGTCGTCG CGCGGCGGCG CGCGCCGCAA GCCGGCGGCG
AAATCCGCAT CGAAGGGCGC GGCGACGAAA ACCGCGGCGA AGAAGACCGC CGCGAAACGC
GGCGCGGCGA GCGCCCCCGC GGCAAAGAAG ACGGCCGCGC GCCGCAAGCA CGCGGCGTGA
 
Protein sequence
MAPRMIWKGA ISFGLVHVPV QLFPATRTVK PSFRMLDKRS MDPIGYRQIN KRTGKEVTRE 
DIVRGYEYEK ERYVVLTDDE IRAANPESTQ TVDILTFVDE DAVSFLYLDT PYYLVPDRKG
EKVYALLRDA LKDSGKIGIA LVVMRDRQHL GALIPVGPML ALDTLRWQEE LRPLDELSVP
ADDAKGAGVT ARELGMAKKL IDDMSGKWTP DEYHDTFRDD ILELVERKVR AGKIEEIEDR
PAQTGRAASN VVDLTELLKR SLKGGAGARA ADLRAERGEG EDEASSSSSS RGGARRKPAA
KSASKGAATK TAAKKTAAKR GAASAPAAKK TAARRKHAA