| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6450 |
|---|
| Symbol | |
|---|
| ID | 4454476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 666606 |
|---|
| End bp | 667760 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639698513 |
|---|
| Product | sigma-54 dependent trancsriptional regulator |
|---|
| Protein accession | YP_840073 |
|---|
| Protein GI | 116686826 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCGA ATCGGTATAA AAGGTATTCT GAGTACGTGA AAGACGACGT GTGCCACGTC
CTTTTTTACC TGGTCACGAC ACATTCGGTC AAAACTTCCC AACCCGGTTA TTACTCCATG
TCGAAATCCG ACGATGACGG CACGCGACTG TTCGGTCGTT CGCGAACAAT TCAGGATCTG
CTGCTGAAAG TGTCGCGCGT CGCCGCCACC CGCGTGAGTG TGCTGGTGGT CGGCGAAAGC
GGTGCGGGAA AAGATATCGT CGCCCGGCTC ATTCACGACA TGAGCCCGCG CCGTCGCGGG
CCGTTCGTGC CCGTCAATTG CGGCGCGATT CCGAAGGACA TCGCGGAGTC GCAGTTGTTC
GGCCACGAAA AAGGCAGCTT CACGGGTGCC GTTGCACAAC ATGTGGGCAT GTTCGAGGCC
GCGCGCGGCG GCACGCTGTT TCTCGACGAG ATCGCCGAGA TGCCGCTCGA ATTGCAGGTC
AAGCTGCTGC GCACGCTCGA AACCAACACG ATCGTGCGCG TGGGCGGCCA CGAGGCGATT
CCGCTCGACG TGCGGATCGT CGCGGCCACC CATCACGACC CGGTCGAGGC CTTGCGCAGC
GGCGCGCTGC GCGAAGACCT GTTCTACCGG ATCGCGCCGA TCGCGCTGCA CGTGCCCGCG
CTCCGGCAGC GCGAGGACGA CGTCGGCGAT ATCGCACTGC AGATCGTCGA ACGGCTGAAC
GCGCGGCACC GCACGCGCAA ACGGCTGTCG ACACAGGCGA TGAAGGCGCT GCGCGCGTAC
ACGTGGCCCG GCAATGTGCG CGAACTGCGC AATACGCTGG AGCGCGCGTT CATCCTCGCC
GACGAGCAGA TCGAGCTGCA GTTGCCGCGC CGCCCGCCGC CGCGCGAGGA AGTGCGTCAC
AACGCGATGA CGCTGCATAT CGGCACGACG CTCGCGCATA CGCAGCAGCG CTTCATCGTC
GCGTCGCTAC GGCATTTCAA CGGCGACAAG CCGCGCACCG CCAAGGCGCT CGGCATCAGC
CTGAAAACGC TGTACAACCG GCTCGCGCTG CTGCCCGAAA GCGAGCGCAA TGCAGCCAGC
GGCAGCGCGC CGCCGGCCGC GAACGCGTCG AACGGCGGCA GCGCCTCCAC TTCGCCGCCC
GCGACGATGC CGTAA
|
|---|
| Protein sequence | MSSNRYKRYS EYVKDDVCHV LFYLVTTHSV KTSQPGYYSM SKSDDDGTRL FGRSRTIQDL
LLKVSRVAAT RVSVLVVGES GAGKDIVARL IHDMSPRRRG PFVPVNCGAI PKDIAESQLF
GHEKGSFTGA VAQHVGMFEA ARGGTLFLDE IAEMPLELQV KLLRTLETNT IVRVGGHEAI
PLDVRIVAAT HHDPVEALRS GALREDLFYR IAPIALHVPA LRQREDDVGD IALQIVERLN
ARHRTRKRLS TQAMKALRAY TWPGNVRELR NTLERAFILA DEQIELQLPR RPPPREEVRH
NAMTLHIGTT LAHTQQRFIV ASLRHFNGDK PRTAKALGIS LKTLYNRLAL LPESERNAAS
GSAPPAANAS NGGSASTSPP ATMP
|
|---|
| |