Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6361 |
Symbol | |
ID | 4454733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 557398 |
End bp | 558465 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639698426 |
Product | secretion protein HlyD family protein |
Protein accession | YP_839986 |
Protein GI | 116686739 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCAAA TCCTGCCCGT ACGATGGAGT TTGCCGATCA TGACCCCACC CACCCCCGCG CCATCGCCCG CTGCGCCCGC GCGTTCCCGG CGACTGGCCG TCGTCGCGAT CGCCGTGATC GCGCTACTGC TGGTCGCACT GCTCGTGTAC GAGTTCTACG CACGCGATCG CGGCACCGAC GACGCGTACG TGACCGGCCA TCTGCACGTG ATCTCGCCGC GCGTCGCCGG CACGGTCGAG CATGTGCTCG TCGACGACAA CCAGTTCGTG CATGCGGGCG ACGCGCTCGT GCAGATCGAC CGGCGCGACT TCGACGTGCG CGTCGCGGCG CAGCGCGCCC GCGTCGCCCA GGCGCATGCC GATGCGAGCC GCGCACGCGC GCTGATCGAG CAGGCGGACG CGGCGCTCGT GTCGGCGCAC GCCGATGCCG AAAAGGCCGA ACTCGATTAC GCCCGTGCAC GCGAACTGAC TCGCGAGACG CCGCGCGGCC TGTCGAAGCA GGAGTTCGAT GCGGCCGACG CCGCCCGCAA GTCGGCCCGC GCGCGCGTCG CGGCGGCCGA TGCGCAACGG CGCAGCGCGC TCGCCGCCGC TCAGGCCGCC GAGGCCGCGT CGAGCCAGAA CGACGCCGAG TTGCGCGACG CGCTGCTGCA ACTCGGCTAC ACGGCGGTCG TCGCGCCGTC GGACGGCTAC GTCGGCAAGA AGACCGTCGA GACCGGCGAG CATGTCGCGC CCGGCCAGGC GCTGCTCACG CTGGTCGAGC CGCATCCGTG GATCGTCGCC AATTTCCGCG AGACGCAGCT ACGGCACGTG CGCGCCGGCG ACGCCGTGCA ACTGCGCTTC GATGCGCTGC CGGAGCGCGC GTTCAGCGGC CGCATCGACA GCCTGTCGCC CGCGACCGGC GCGCAGTTCG CGCTGCTGCC GCCCGACAAC GCGACCGGCA ATTTCACGAA GGTCACGCAG CGCGTGCCCG TGAAGATCCT GCTCGACGGC CCCGCCGCGA CGGAGCCGCG CATCCGGCCC GGGCTGTCGG TCGTCGTCAC ACTGCAACCC GGCAGCGAAT CGCGATGA
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Protein sequence | MRQILPVRWS LPIMTPPTPA PSPAAPARSR RLAVVAIAVI ALLLVALLVY EFYARDRGTD DAYVTGHLHV ISPRVAGTVE HVLVDDNQFV HAGDALVQID RRDFDVRVAA QRARVAQAHA DASRARALIE QADAALVSAH ADAEKAELDY ARARELTRET PRGLSKQEFD AADAARKSAR ARVAAADAQR RSALAAAQAA EAASSQNDAE LRDALLQLGY TAVVAPSDGY VGKKTVETGE HVAPGQALLT LVEPHPWIVA NFRETQLRHV RAGDAVQLRF DALPERAFSG RIDSLSPATG AQFALLPPDN ATGNFTKVTQ RVPVKILLDG PAATEPRIRP GLSVVVTLQP GSESR
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