| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6327 |
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| Symbol | |
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| ID | 4454095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 515183 |
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| End bp | 516619 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639698392 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_839952 |
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| Protein GI | 116686705 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0452278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.980568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACT CGATCGAACC CGTCGCCCCG CCGCCCGCCG CCGAAGCGGC CACCGTGGCC
ACAGCCGTGC CGGCCGCCGC GCGCGGCGCC GCCTCCGATA CGCCGCCGCC CCGCCGCGGC
CGCACGCTGG CCGTGCCGCT CGCGGCCGTC GCGCTCGCCG CCGCGCTGCT CGCGCTCGGC
ATCGTGCCGC GGATCGATGC ACGCGCCGCG CAGCGTGCGC AGGTCGCCGC GCAGCAGGCG
CTGCCGGTGT CGGTCATCGT GCCCGGCGCG GCGCCGGCCG ACCAGACGCT GACGCTGCCC
GGCTCGGTGG CGCCGTATGC GGACGCGTCG ATCTATGCGC GCACAAGCGG TTATATCGCG
CACTGGAGCG TCGATCTCGG CACGCACGTG AAGGCCGGCC AGACGCTCGC GCAGATCTCG
GCGCCCGATC TCGACGCGCA GTTGCGCCAG GCGCGCGCCG ACGAAGCGAG CGCGCAGGCG
AACTACGACT ATGCGAAATC CACCGCGCAG CGTTGGCAGG ACATGCTGAA AACGCAGTCG
GTATCGCAGC AGGACACCGA CACGAAGGTC GCGGACATGA ACGCGAAGCG CGCGATGCTC
GCGTCCGCGC AGGCGAACGT CGCGCATCTC GCCGAACTCG TGTCGTACGA GTCCGTCACC
GCGCCGTTCG ACGGCGTGAT CACCGCACGC AACGTCGACG TCGGCACGCT GGTCACCGCG
GGCGGCACGC CGGGCAGCCC GGGCCTGTCC GGGGAACTGT TCCATCTCGA ACAGACGGAC
ACGCTGCGCG TGTTCGTCGA TGTGCCGCAG GACAGCGCGA CCGGCGTGTC GGCCGGCACC
TCCGTCTACC TGACGACGCC GCAGTATCCG GGGCGGCGGT TTGCCGCGCA GGTCGCGCGC
AGCGCGGGCG CGATCGATCC CGTCACGCGC ACGCTGCGTG TCGAGATCGA CGTCGACAAC
CGCGACGGCG CGCTGATGCC CGGCGCGTAT GCGCAGGCGC ATCTCGTCTT GCCGAGTGCG
GCGCCGGCGC TCGAGCTGCC GGTCAGTGCG CTGCTGTTCC GCCCGAACGG CGTGACGGTC
GCCACCGTCG GCGCGAACGG GCAAACCGCG CTGAAGACCG TGCAGATCGG GCGGGATTTC
GGCACGCGCG TCGAGATCGT CGCGGGGCTC GCCGCGACCG ATCGTGTGAT CGACAACCCG
GGCGATGCGA TCACGGCCGG GGAAGCCGTG AAGATCGTGT CGACTTCGCA CGATGCGGCG
CCGGTTGCGG CTTCGTCTGC TTCGTCTGCT TCGTCCGCTT CGTCCGCTTC GTCCGCGCAG
GCCGCGCAGG CCGCGCAGCC AGCGTCCGCG ACCGGTATGC GCAACGTGCC GCCGCTGCGC
GCGGCCGGCG TCGCACCTGC TGCGTCAACA CCCACTCCGG CGCCCGCCCG CGGCTGA
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| Protein sequence | MNDSIEPVAP PPAAEAATVA TAVPAAARGA ASDTPPPRRG RTLAVPLAAV ALAAALLALG
IVPRIDARAA QRAQVAAQQA LPVSVIVPGA APADQTLTLP GSVAPYADAS IYARTSGYIA
HWSVDLGTHV KAGQTLAQIS APDLDAQLRQ ARADEASAQA NYDYAKSTAQ RWQDMLKTQS
VSQQDTDTKV ADMNAKRAML ASAQANVAHL AELVSYESVT APFDGVITAR NVDVGTLVTA
GGTPGSPGLS GELFHLEQTD TLRVFVDVPQ DSATGVSAGT SVYLTTPQYP GRRFAAQVAR
SAGAIDPVTR TLRVEIDVDN RDGALMPGAY AQAHLVLPSA APALELPVSA LLFRPNGVTV
ATVGANGQTA LKTVQIGRDF GTRVEIVAGL AATDRVIDNP GDAITAGEAV KIVSTSHDAA
PVAASSASSA SSASSASSAQ AAQAAQPASA TGMRNVPPLR AAGVAPAAST PTPAPARG
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