Gene Bcen2424_6306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6306 
Symbol 
ID4454470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp489434 
End bp490525 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content65% 
IMG OID639698371 
ProductABC transporter related 
Protein accessionYP_839931 
Protein GI116686684 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.517463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTC TGCATATTCG CGACGTCCGC AAGAACTACG GCAGCGTTGC GTGCCTCAAG 
GCAATCAACA TCGATGCCGA CGACGGTGAA TTCCTCGTGC TGCTCGGCCC GTCCGGCTGC
GGGAAGTCGA CCTTGCTGAA CGCGATCGCG GGGCTCGAAC CGGTCAACGA CGGCGAGATC
GTCATCGACG GTTCGGTCGT CAACGACGTC GAATCCGCGA AGCGCGATAT CGCGATGGTG
TTTCAGTCGT ATGCGCTTTA CCCGACGATG ACGGTGCGCA ACAACCTGAC ATTCGGGATG
CGCGTGCGGG GGGCATCGCG ATCCGAGCAG GAGGAGGCGG TCAAGCGGGT CGCGGCGATC
CTGCAGCTCG ATCAGTTGCT CGATCGCAAG CCCAGCCAGC TGTCGGGTGG GCAGCGCCAG
CGCGTGGCCA TGGGGCGCGC GATGGTGCGG GAACCGAAGA TCTTCCTGTT CGACGAGCCG
TTGTCGAATC TCGACGCGAA ACTGCGCACG GAAATGCGCG CGGAAATCAA GAAGCTGCAC
CAGCGTGTCG GCACGACCAC GGTCTACGTG ACGCACGACC AGATCGAAGC GATGACGCTG
GCGACGAAGA TCGTCGTCAT GCGGGGCGGC GAGGTGCAGC AGATCGGCAC GCCGGAGGAT
GTTTACGATC GTCCGGCGAA CCTGTTCGTC GCGCGTTTCA TCGGGTCGCC CGCGATGAAC
TGCCTGACGG GCGTGCTGCG TGGCCGTGAC ACCCACGCGG TTTTCATCGG CGGCGACGGC
AGCGGGCACA CCGTCGAGAT CGCGCTGGGC GCGCTGAGCG ACGCGCAACG CGGCTACCTC
GACCGGGACG TCGTACTGGG CGTTCGCCCG GAATGGCTCG CGCCGGGCGT CGGGGCAACG
AGCTTCCAGG CGACGGTCGA CGTCGTGGAG CCGACGGGTG CCGACAACTT CGTGCTGCTG
TCGGTCGCGG GCGAATCGAT CATGGCCCGG TTCGCGCCCG GTGTCGGACG CGTCGGGGAC
GTGATGCAGC TCGTCGTCAA TGCGGACAAG GCACTGATCT TCGATCCGGC GACCGAACAG
CGCGTCGTCT GA
 
Protein sequence
MASLHIRDVR KNYGSVACLK AINIDADDGE FLVLLGPSGC GKSTLLNAIA GLEPVNDGEI 
VIDGSVVNDV ESAKRDIAMV FQSYALYPTM TVRNNLTFGM RVRGASRSEQ EEAVKRVAAI
LQLDQLLDRK PSQLSGGQRQ RVAMGRAMVR EPKIFLFDEP LSNLDAKLRT EMRAEIKKLH
QRVGTTTVYV THDQIEAMTL ATKIVVMRGG EVQQIGTPED VYDRPANLFV ARFIGSPAMN
CLTGVLRGRD THAVFIGGDG SGHTVEIALG ALSDAQRGYL DRDVVLGVRP EWLAPGVGAT
SFQATVDVVE PTGADNFVLL SVAGESIMAR FAPGVGRVGD VMQLVVNADK ALIFDPATEQ
RVV