| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6267 |
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| Symbol | |
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| ID | 4454070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 444362 |
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| End bp | 446443 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639698332 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_839892 |
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| Protein GI | 116686645 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain)
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.57074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.863761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCGA CCAGTTATAA CGCGTTGCTC GTTCTTCTTT CGCTGCTGAT TGCCATATTG
GCGTCCTACA CCGTGCTGGA CATGGCCGGG CGCATCAAGA GCGCTCAGGG GCACGCCGCA
CGGTGGTGGC TGGTCGGCGG GGCTTGCGTG ATGGGCACGG GCATCTGGTC GATGCATTTC
GTCGGCATGC TCGCTTTCGC GTTGCCGATT CCACTGGGAT ACGATCCGGC CATTACCTTG
CTGTCGTTGC TGATCGCGAT CGTCTGCTCC ACGTGCGCGC TGTGGCTCGT CTGCCGGGAC
ACGCTGAAGT GGCGCCGGCT GTGCGGCGGG GCCATGTTGA TGGGGGCCGG CGTGGCGGGC
ATGCATTACA CGGGCATGGC GTCGATGCGC ATGTCGCCCG GCATCCAGTA CGACCCGTTG
CTCGTTTGCC TGTCGGTCGC GATTGCCGTG GTCGCATCGG GCGCCGTACT GTGGATCGTA
TTCATTCGGC GTGCCAACTC GTCGCGCGTG CGGCTGCTCA ATCTGGGATC GGCCGTCCTG
ATGGGCGCCG CCATCGCCGG CATGCACTAT ACCGGGATGG CCGCCGCCCG ATTCCCGCTC
GGCAGCCTCT GCGGGGCAGC CGGCTCGCGC ATGGACGCCG GCTGGCTTGC ACTGGTCATC
ATCGTCGCCA CGTTGGCCAT ACTCGCCATC GCGTTGATCG TCTCCATCCT CGACCTGCGT
CTGGAGGCCC GCACGGCGGT ACTGGCCACG TCACTGGCCG AAGCCAACCA GGAATTGACG
TATCTGGCGC TGCACGACAA CCTCACCAAG CTGCCCAATC GCGTGCTGCT CGAGGACCGG
ATCGATCAGG CGATCCAGGC CGCCGACCGC GAGCACGGAA GCTTCGCGCT GATGTTCATG
GACCTCGATG GATTCAAGGC GGTCAACGAT GCCTATGGTC ATCACGTCGG CGATCTGTTG
CTGGTCGACG TGGCGCGGCG CATCGGCGCG AACCTGCGTT CGCAGGACAC GATTGCCCGC
CTGGGGGGCG ACGAATTCGT GCTGGCCGTG GCAGTGGACG AGCCCGCGGA CGCGGCCGAC
GTGGCGGACA AGATATTGGC GGTGATCCGG AAACCGTTCC GCGTGTCCGA ACACGAATTG
CGCGTGTCGG CCAGTATCGG CATTGCGCTC TATCCCGGCA ACGGCAGCGA TTTTCGCGAC
CTGATGACCA ACGCCGATGC AGCGATGTAT CACGCCAAGG CACTCGGCCG GAACGCGTAC
TGCTTCTTCG AGGCATCGAT GAACGCGAAT GTCCGCGAGC ACCTGAAAAT CGTGCAGGAG
CTCCGTCTGG CGCTGGAGCG GCGTGAGCTG GTCCTGCATT ACCAGCCGAA GTTCGACGTC
CCGCACGGAC CGATCATCGG CGTCGAGGCG CTGTTGCGAT GGATGCACCC GACACGCGGT
CTCATTTCAC CCGATCAGTT CATCTCGATT GCGGAAAAGA CCGGCTTGAT CGTGCCGATC
GGCGAGTGGG TGCTGGACGA GGCCTGCCGG CAGATGCGCG TGTGGTGCGA TGCCGGTCGA
ACCGACTGGA CGATGGCCGT CAACCTGTCA CCGCTGCAAT TCGGTCACGC GAGTCTGATC
CGGGTCGTGG AGGCCACATT GCAGCGGCAC GCGCTGGAGC CGCACTGCCT GACGCTGGAG
ATCACGGAAT CGACCGCGAT GCGCGATGCG GACGCCAGCT TGAGAATCCT GCAGCAGCTT
CACGACATGG GCGTGCGCAT TTCCATCGAC GACTTCGGAA CGGGTTATTC AAGCTTGCTG
TATCTGAAGC GCTTGCCGGC CAGCGAGCTC AAGATCGACC GGGGATTCAT CCGCGATCTC
GAACACGATA CCGAAGATGC CGCGATCATT TCGGCGATCG TCGCGCTCGG CCGGGCACTC
GACCTGAAGA TCGTCGCGGA GGGCGTTGAA ACGGCGGCCC AGCAGCAGTT CCTGACCCGC
CTCGGTTGCA ACTCGCTGCA GGGTTTTCTG CTCGGGCGCC CGATGCCGGC GGATCACTTC
GTCGAAATGA CCACGCAAGG CACGGCGATC AAGCCTGTTT GA
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| Protein sequence | MLPTSYNALL VLLSLLIAIL ASYTVLDMAG RIKSAQGHAA RWWLVGGACV MGTGIWSMHF
VGMLAFALPI PLGYDPAITL LSLLIAIVCS TCALWLVCRD TLKWRRLCGG AMLMGAGVAG
MHYTGMASMR MSPGIQYDPL LVCLSVAIAV VASGAVLWIV FIRRANSSRV RLLNLGSAVL
MGAAIAGMHY TGMAAARFPL GSLCGAAGSR MDAGWLALVI IVATLAILAI ALIVSILDLR
LEARTAVLAT SLAEANQELT YLALHDNLTK LPNRVLLEDR IDQAIQAADR EHGSFALMFM
DLDGFKAVND AYGHHVGDLL LVDVARRIGA NLRSQDTIAR LGGDEFVLAV AVDEPADAAD
VADKILAVIR KPFRVSEHEL RVSASIGIAL YPGNGSDFRD LMTNADAAMY HAKALGRNAY
CFFEASMNAN VREHLKIVQE LRLALERREL VLHYQPKFDV PHGPIIGVEA LLRWMHPTRG
LISPDQFISI AEKTGLIVPI GEWVLDEACR QMRVWCDAGR TDWTMAVNLS PLQFGHASLI
RVVEATLQRH ALEPHCLTLE ITESTAMRDA DASLRILQQL HDMGVRISID DFGTGYSSLL
YLKRLPASEL KIDRGFIRDL EHDTEDAAII SAIVALGRAL DLKIVAEGVE TAAQQQFLTR
LGCNSLQGFL LGRPMPADHF VEMTTQGTAI KPV
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