Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6240 |
Symbol | deoA |
ID | 4454316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 418173 |
End bp | 419489 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639698305 |
Product | thymidine phosphorylase |
Protein accession | YP_839865 |
Protein GI | 116686618 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0213] Thymidine phosphorylase |
TIGRFAM ID | [TIGR02643] thymidine phosphorylase [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.683278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.643776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCTAC CGCAGGAATT CATTCGCAGG AAGCGTGACG GGCAGCCGCT CGATCGCGAC GACATGGCCG CGTTCGTGCG CGGCGTGACC GACGGCAGCG TGACCGAGGG CCAGGTGGCC GCGTTCGCGA TGGCCGTGTA TTTCAACGAC CTGAGCACCG ACGAGCGCGT CGCGCTGACG CTCGCGCAGC GCGATTCGGG CGACGTGCTC GACTGGCGCG CACTCGATCT CGGCGGGCCG GTGATCGACA AGCATTCGAC GGGCGGCGTC GGCGACGTCG TGTCGCTGAT GCTCGGGCCG ATGGTGGCCG CGTGCGGCGG CTACGTGCCG ATGATCTCGG GGCGCGGGCT CGGCCATACC GGCGGCACGC TCGACAAGTT GAGCGCGATC CCCGGTTACG ACGTGATGCC CGATACGGAT GCGTTTCGCC GCACGGTGCG CGAGGTCGGC GTCGCGATCA TCGGGCAGAC CGCGCGGCTC GCGCCGGCCG ACAAGCGCAT CTATGCGATC CGCGACGTGA CGGCGACCGT CGAATCGGTC GCGATGATCA CCGCGTCGAT CTTGTCGAAG AAGCTCGCGG CGGGGCTCGA CGGGCTCGTG ATGGACGTCA AGGTCGGCTC CGGCGCGTTC ATGCCGACCG CGGAGAAATC GGCGGAACTG GCGCGCAGCA TCGTCGACGT CGGCAATGGC GCCGGCATGA AGACGACCGC GATCCTCACC GACATGAACC AGTCGCTCGC GCCGTGCGCG GGCAATGCGC TCGAGGTGGC GTGCGCGATC GACTACCTGA CGGGCAAGTC GCGTCCCGCC CGTTTGCACG ACGTGACGAT GGCGCTGTCG GCGGAGCTGC TCGTCACCGG CGGGCTGGCG CGCGATGCCG CCCATGCGCG CGAGAAGCTG CAGCAGGCGC TCGATTCGGG CGCGGCCGCC GAGCGTTTCG CGCGCATGGT CGCCGCGCTC GGCGGCCCGG CCGACCTGCT CGACGCGCCC GCGCGGCATC TGGCGCGGGC GGCGGTGATC GTGCCGGTTC CGGCTCCCGT GAGCGGCGTG GTGCAGCGGG TCGACTGCCG CGCGCTCGGG CTCGCGGTGG TCGCGCTCGG CGGCGGCCGC ACGCGCGCGG AGGATGCGAT CGACGTCAGC GTCGGCTTGT CGGCGCTCGC GGAGATCGGG CAGCGCATCG AGGCCGGCGA GCCGCTGGGT TTCGTGCACG CCCGCGACGA AGCGGCCGCG GCCCACGCGG TGGATGCGAT CCGCCGCGGC TACGTGCTCG GCGAGACCGG CGAAGCGCCG CCGACCCTTT ACCAGCGCGT CGACTGA
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Protein sequence | MFLPQEFIRR KRDGQPLDRD DMAAFVRGVT DGSVTEGQVA AFAMAVYFND LSTDERVALT LAQRDSGDVL DWRALDLGGP VIDKHSTGGV GDVVSLMLGP MVAACGGYVP MISGRGLGHT GGTLDKLSAI PGYDVMPDTD AFRRTVREVG VAIIGQTARL APADKRIYAI RDVTATVESV AMITASILSK KLAAGLDGLV MDVKVGSGAF MPTAEKSAEL ARSIVDVGNG AGMKTTAILT DMNQSLAPCA GNALEVACAI DYLTGKSRPA RLHDVTMALS AELLVTGGLA RDAAHAREKL QQALDSGAAA ERFARMVAAL GGPADLLDAP ARHLARAAVI VPVPAPVSGV VQRVDCRALG LAVVALGGGR TRAEDAIDVS VGLSALAEIG QRIEAGEPLG FVHARDEAAA AHAVDAIRRG YVLGETGEAP PTLYQRVD
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