Gene Bcen2424_6233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6233 
Symbol 
ID4454309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand- 
Start bp408353 
End bp409045 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID639698298 
ProductTetR family transcriptional regulator 
Protein accessionYP_839858 
Protein GI116686611 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.275362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.0744328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACATG ACGAGGCGGC AATCGCAGCC ACCGACCGTG ACGAAACGCC GGCGCCTTTG 
CGGCGACGCA AGGCGCATAT TCGCGAGTCC AACGAAGCGC ATCTGCTCGC GTGCGCGGAA 
GCCGTATTCG CGGAACGCGG GCTCGCCGGC GCCAGCACCG CGATGATCGC GGAGCGCGCC 
GGCCTGCCGA AGGCGAACGT GCACTACTAC TTCCCGACCA AGCTCGCGCT GTACCGCCGC 
GTGCTCGACG ACCTGTTCGA GGACTGGCAT CGCGCGGCCG GCTCGTTCGA GGCCGACGAC 
GATCCGGTCG AAGCGATCGG CGGCTACGTG CGCGCGAAGA TGACGCTGTC GCAGCGGCGC 
CCGCTCGGCT CGAAGGTGTG GGCCAACGAG ATCATCCACG GCGCGGAGCA CATGCAGGAC 
ATCCTGTCGC AACGCGTGAA GCCGTGGTTC GACGCGCGCG TCAGGGTGAT CGAAGGCTGG 
ATCGCGCGCG GGCTGCTCGC GCCGATCGAC CCGCATGCGC TGATGTACCT GATCTGGGCG 
ACCACGCAGC ACTATGCGGA TTTCGATGCG CAGATTCGCG CGCTGAGCGG CAAGCGCGCG 
TTCACGAAGA AGGCGTTCGA CGAAAAGACC GAGCAGGTCG TGCAGCTCGT GATTCGCGCG 
TGCGGCGCGG TGTCGCCGAA CGCGAAGCCT TAA
 
Protein sequence
MRHDEAAIAA TDRDETPAPL RRRKAHIRES NEAHLLACAE AVFAERGLAG ASTAMIAERA 
GLPKANVHYY FPTKLALYRR VLDDLFEDWH RAAGSFEADD DPVEAIGGYV RAKMTLSQRR 
PLGSKVWANE IIHGAEHMQD ILSQRVKPWF DARVRVIEGW IARGLLAPID PHALMYLIWA 
TTQHYADFDA QIRALSGKRA FTKKAFDEKT EQVVQLVIRA CGAVSPNAKP