Gene Bcen2424_6207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6207 
Symbol 
ID4454162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp374618 
End bp375331 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID639698267 
Productcarboxymethylenebutenolidase 
Protein accessionYP_839832 
Protein GI116686585 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00179618 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTCAAA CATCCGGTTC CACGATCACG TTTCGCCGCC CCGACGGCCA GGAGCTACAG 
GGCTATCTCG CCACGCCGGC ACGGACCGAA GGCGCGCCCG CGGTCGTCAT CATCCAGGAA
TGGTGGGGGC TGAACGACCA GATCCGCGGC GTCGCGGATC GCCTCGCGCG CTGCGGCTAC
TTCGCGCTCG TGCCCGACCT GTATCGCGGC AAGTCGACGG TCGAGGAAGA GGAAGCACAC
CACCTGATGA CGGGCCTCGA TTTCGGCGAC GCCGCGTCGC AGGACATTCC CGGCGCAGTC
GCGTACCTGA AGACGCTGGC GCCGCGGGTC GCGGTGACGG GCTACTGCAT GGGCGGCGCC
CTCACGCTGC TGTCGCTGCA GTACGCCGAG GCGGACGCCG GCGTCACGTG GTACGGCCTG
CCGCCGCTCG ACTACATCGA TCCGGCCAAG CTCAAGGTGC CGCTGATGGG ACACTGGGCG
ACGCAGGATG CGTTCTTCAA GATCGACCAG GTCGACGCAC TGGAAAAGAA GCTGACCGAT
GCGAAGGTCG GTTTCGAATT CCATCGCTAT CTCGCGCACC ATGCGTTCGC GAACGAAACG
GCCGTCGGCC CCGGCCGCAT CGCCGGCACG CAGTTCGATC CGGTGTGGTC GGAAACGGCG
TGGGACCGCA CGCTCACGTT CTTCGGCCGG ACGCTCTGGA CGAAGCAGGC CTGA
 
Protein sequence
MSQTSGSTIT FRRPDGQELQ GYLATPARTE GAPAVVIIQE WWGLNDQIRG VADRLARCGY 
FALVPDLYRG KSTVEEEEAH HLMTGLDFGD AASQDIPGAV AYLKTLAPRV AVTGYCMGGA
LTLLSLQYAE ADAGVTWYGL PPLDYIDPAK LKVPLMGHWA TQDAFFKIDQ VDALEKKLTD
AKVGFEFHRY LAHHAFANET AVGPGRIAGT QFDPVWSETA WDRTLTFFGR TLWTKQA