| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6205 |
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| Symbol | |
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| ID | 4454160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 369791 |
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| End bp | 372982 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639698265 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_839830 |
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| Protein GI | 116686583 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.956257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.010149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGT TCTTTATCGA TCGCCCGATC TTCGCGTGGG TGATCGCGAT CGTGCTGATG
CTGGCCGGCG TTGCATCGAT CTTCAAGATG CCGATCGCGC AGTATCCGAC GATCGCACCG
CCGACGATCC AGATCCAGGC GAACTATCCG GGCGCTTCCG CGAAGACGGT GGAAGACACG
GTGACGCAGG TGATCGAGCA GCAGATGAGC GGGCTCGACA ACTTCCTGTA CATGTCGTCG
ACGAGCGACG ATTCGGGCAA CGCGACGATC ACGCTGACCT TCTCGCCGGG CACGAATCCG
GACGTCGCGC AGGTCCAGGT GCAGAACAAG CTGTCGCTCG CGACGCCGAA CCTGCCGCAG
GTCGTGCAGC AGCTCGGCAT GCAGGTGACG AAGTCGAGCA GCAACTGGCT GATGTGGTTC
GCGTTCAACT CCGAGGACGG CCGGATGTCG AAGGAGGACC TGACGAACTA CGTGGCCTCG
CACGTGCTCG ATCCGCTGAG CCGCGTGAAC GGCGTCGGCC AGACGCTGCT GCTCGGTTCG
CAGTTCTCGA TGCGGATCTG GCTCGACCCG ATCAAGCTGA CCAACTACAG CCTCACGCCG
ACCGACGTGA CGGCCGCGAT CACGCAGCAG AACGTGCAGA TCGCGGGCGG CCAGATCGGC
GGCACGCCGG CGAAGCCGGG CACCGTGCTG CAGGCGACGA TCACCGAATC GACGCTGCTG
CGCACGCCCG AGCAATTCGG CAACATCCTG CTGAAGGTCA ACCAGGACGG CTCGCAGGTT
CGCCTGAAGG ACGTCGGCCG CGCGGCGCTG GGTTCGGAGA ACTACACGTT CGACACGAAG
TACATGGGAC AGCCGACAGC CGGCCTCGGT ATCCAGCTCG CGACCGGTGC GAACGCGCTG
GCGACCGCGA ACGCGCTGCG GGCCAAGATC GACGAGCTGT CGAAGTACTT CCCGCACGGT
CTCGTCGTGC ACTACCCGTA CGACACGACG CCGTTCGTGC GCCTGTCGAT CGAGGAAGTG
GTCAAGACGC TGATCGAGGG CATCGTGCTC GTGTTCCTCG TGATGTACCT GTTCCTGCAG
AACCTGCGCG CGACGATCAT CCCGACGATC GCGGTGCCGG TCGTGCTGCT CGGTACGTTC
GCGATCATGG GCCTCGCCGG GTTCTCGATC AACACGCTGT CGATGTTCGG CCTCGTGCTC
GCGATCGGCC TGCTGGTCGA CGATGCGATC GTGGTGGTGG AGAACGTCGA ACGCGTGATG
GCGGAGGAAG GGCTGTCGCC GAAGGAGGCG ACCCGCAAGG CGATGAGCCA GATCACCGGC
GCGCTCGTCG GCGTGGCGCT CGTGCTGTCG GCGGTGTTCG TGCCGGTGGC GTTCTCCGGC
GGCTCGGTCG GTGCGATCTA TCGTCAGTTC TCGCTGACGA TCGTGTCGGC GATGGTGCTG
TCCGTGCTCG TCGCGTTGGT TCTGACGCCG GCCCTGTGCG CGACGATCCT GAAGCCGATC
GAGAAGGGGC ATCACGAAGA GAAGAAGGGC TTCTTCGGCT GGTTCAACCG GACGTTCGAT
CGCAGCCGCG ATCGCTACAC GAGCGGCGTG AACCACGTGA TCAAGCGCTC GGGCCGCTGG
CTCGTGATCT ATCTCGCCGT GTTCCTCGCG GTCGGCGTGA TGTTCGCGCG GCTGCCGAAG
TCGTTCCTGC CCGACGAAGA CCAGGGCTAC ATGTTCATGA TCGTGCAGAC GCCGTCCGGC
TCCACGCAGG AAACGACCGG CAAGACGCTC GACAACATCA ACACGTACCT GACCACCGCC
GAGAAGGACG TGGTCGACTC GGTGTTCACG GTCAACGGCT TCAGCTTCGC GGGCCGCGGC
CAGAATGCGG GCCTCGTGTT CGTGAAGCTG AAACCGTACG AGCAGCGCCA GCGTTCGGAC
CAGAAGGTGC AGGCGCTGAT CGGCCGGACC TTCGCGCACT ATTCGACGTA CAAGGACGGG
ATGGTGATTC CGTTCAACCC GCCGTCGATT CCCGAACTCG GCACGGCTGC CGGTTTCGAC
TTCGAGCTGA CGGACAACGC CGGCCTCGGT CACGAAGCGC TGATGGCCGC GCGCGGCCAG
TTGCTCGGGC TGGCCGCGAA GGACCCGGCG CTGGCGCTGG TGCGCCCGAA CGGCCTGAAC
GACACGCCGC AGTACAAGGT CGACATCGAT CGCGAGAAGG CGAACGCGCT CGGCGTGACG
GCCGCGGCGA TCGACCAGAC GTTCTCGATC GCATGGGCGT CGCAGTACGT GAACAACTTC
CTCGATACCG ACGGCCGGAT CAAGAAGGTG TACGTACAGT CGGACGCGCC GTTCCGGATG
ACGCCGGAGG ACATGAACAT CTGGTACGTG CGCAACAGCG CGGGCGGGAT GGTGCCGTTC
AGCGCGTTCT CGACCGGTCA CTGGATCTAC GGGTCGCCGA AGCTCGAGCG TTACAACGGC
GTGTCGTCGA TCGAGATCCA GGGGCAGGCC GCGGAAGGCA AGTCGACCGG CCAGGCGATG
GCCGCGATGG AAGCGCTCGC GAGCAAGCTG CCGGAAGGCA TCGGCTATTC GTGGACGGGC
CTGTCGTTCC AGGAAATCCA GTCCGGCTCG CAGGCGCCGA TCCTGTATGC GATCTCGATC
CTCGTCGTGT TCCTGTGTCT CGCGGCGCTG TATGAAAGCT GGTCGATTCC ATTCTCGGTG
ATCATGGTCG TGCCGCTCGG CGTGGTCGGC GCGCTGCTCG CGACGATGCT GCGCGGTCTC
GAGAACGACG TGTTCTTCCA GGTCGGCCTG CTGACGACCG TGGGCTTGTC TGCAAAGAAC
GCGATCCTGA TCGTCGAGTT CGCGCGCGAG CTGCAGGCGG GGGGGAACAT GGGGCCGGTG
CGTGCGGCGA TCGAGGCGGC GCGCCTGCGG CTGCGTCCGA TCCTGATGAC GTCGCTCGCG
TTCATGCTGG GCGTGCTGCC TCTCGCGATC AGTAACGGCG CGGGCTCGGC CAGCCAGCAT
GCGATCGGTA CGGGCGTGAT CGGCGGGATG ATCACGGCGA CGTTCCTCGC CATTTTCATG
ATCCCGATGT TCTTCGTGCG GGTTCGCGCG ATCTTCAGCG GCGAGACGGA AAACGTCGAC
GACGCATGGC GTCTCGTGCA GGGCGACCTG CAGCGCGGTC ACGACGACGC ACACGATTCG
AAGGGGCAGT AA
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| Protein sequence | MAKFFIDRPI FAWVIAIVLM LAGVASIFKM PIAQYPTIAP PTIQIQANYP GASAKTVEDT
VTQVIEQQMS GLDNFLYMSS TSDDSGNATI TLTFSPGTNP DVAQVQVQNK LSLATPNLPQ
VVQQLGMQVT KSSSNWLMWF AFNSEDGRMS KEDLTNYVAS HVLDPLSRVN GVGQTLLLGS
QFSMRIWLDP IKLTNYSLTP TDVTAAITQQ NVQIAGGQIG GTPAKPGTVL QATITESTLL
RTPEQFGNIL LKVNQDGSQV RLKDVGRAAL GSENYTFDTK YMGQPTAGLG IQLATGANAL
ATANALRAKI DELSKYFPHG LVVHYPYDTT PFVRLSIEEV VKTLIEGIVL VFLVMYLFLQ
NLRATIIPTI AVPVVLLGTF AIMGLAGFSI NTLSMFGLVL AIGLLVDDAI VVVENVERVM
AEEGLSPKEA TRKAMSQITG ALVGVALVLS AVFVPVAFSG GSVGAIYRQF SLTIVSAMVL
SVLVALVLTP ALCATILKPI EKGHHEEKKG FFGWFNRTFD RSRDRYTSGV NHVIKRSGRW
LVIYLAVFLA VGVMFARLPK SFLPDEDQGY MFMIVQTPSG STQETTGKTL DNINTYLTTA
EKDVVDSVFT VNGFSFAGRG QNAGLVFVKL KPYEQRQRSD QKVQALIGRT FAHYSTYKDG
MVIPFNPPSI PELGTAAGFD FELTDNAGLG HEALMAARGQ LLGLAAKDPA LALVRPNGLN
DTPQYKVDID REKANALGVT AAAIDQTFSI AWASQYVNNF LDTDGRIKKV YVQSDAPFRM
TPEDMNIWYV RNSAGGMVPF SAFSTGHWIY GSPKLERYNG VSSIEIQGQA AEGKSTGQAM
AAMEALASKL PEGIGYSWTG LSFQEIQSGS QAPILYAISI LVVFLCLAAL YESWSIPFSV
IMVVPLGVVG ALLATMLRGL ENDVFFQVGL LTTVGLSAKN AILIVEFARE LQAGGNMGPV
RAAIEAARLR LRPILMTSLA FMLGVLPLAI SNGAGSASQH AIGTGVIGGM ITATFLAIFM
IPMFFVRVRA IFSGETENVD DAWRLVQGDL QRGHDDAHDS KGQ
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