Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6198 |
Symbol | |
ID | 4454153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 360966 |
End bp | 361856 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639698258 |
Product | LysR family transcriptional regulator |
Protein accession | YP_839823 |
Protein GI | 116686576 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0533844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGAC GACTCCCTCC ATTGAATTCG CTGCGCGCGT TCGAAGCCGC CGCGCGGCTC GGCAGCTTCA CGCTGGCCGC GGACGAGCTG TGCGTGACGC ACGGCGCGAT CAGCCGGCAT GTGCAGCAAC TGGAAGCATG GCTTGGCCGG CCGCTGTTCG AACGCCACAA CCGGCGCGTC GAACTGACCG CGGCCGGCCG CGCGTACCTC GCCGAGGTCG GCGCTTCGTT CGACCGGATC GCGCTCGCCA CCGCACAGCA TTTCGGCCAC GCACAGCAGC GCGTGCTGCG CGTCAGTGCA CCCGCGACGT TCTCGCTGCG CTGGCTCGTC CCGAAGCTGT CGTCGTTCCA GGTCGCGCAT CCGGCCATCG AGGTGCGGCT GTCGACGTCG AACGAGCCGA TCGACAAGTT GCGCGACAAG GTCGACCTGA TCGTTCGCGG CGGCCCGCAG GCCATCGACG GGTACGTCGC GGAGGAATTC CTGTCCGAAG TCCGGCTGCC GGTGTGTGCG CCGAAGTTGC TGGAGGGCCG GTCGCTGGAT ACACCCGCCG ATCTCGCCGG CTTCACGCTG CTGCACGCGG CAACCTATCC GGGCATGTGG CCGGAGTGGC TCGCGGCGGC CGGGCATCCG AACCTCGTGC CGCGGCACTC GCTCACCCTC GAGCATTTCT ACCTGACGCT GCAAGGCGCG CTCGACGGGC TCGGCGTCGC GATGGGGCCG ATCGCGCTCG TCGCCGACGA CATCGCCGAA GGCCGGCTCG TGCAGCCGTT CAGCGAACCG GCGCTGCCGC CATGGCGCTA CTTCACGTAT GTGGCGTCCG CACGGGCGGA CGATGACGCC GTACGCGCGT TCAAGGACTG GCTGAAGGCA ACGGGAAGGG CGACTGTGTA G
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Protein sequence | MARRLPPLNS LRAFEAAARL GSFTLAADEL CVTHGAISRH VQQLEAWLGR PLFERHNRRV ELTAAGRAYL AEVGASFDRI ALATAQHFGH AQQRVLRVSA PATFSLRWLV PKLSSFQVAH PAIEVRLSTS NEPIDKLRDK VDLIVRGGPQ AIDGYVAEEF LSEVRLPVCA PKLLEGRSLD TPADLAGFTL LHAATYPGMW PEWLAAAGHP NLVPRHSLTL EHFYLTLQGA LDGLGVAMGP IALVADDIAE GRLVQPFSEP ALPPWRYFTY VASARADDDA VRAFKDWLKA TGRATV
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