| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6168 |
|---|
| Symbol | |
|---|
| ID | 4454531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 329458 |
|---|
| End bp | 330462 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639698228 |
|---|
| Product | ectoine utilization protein EutC |
|---|
| Protein accession | YP_839793 |
|---|
| Protein GI | 116686546 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | [TIGR02992] ectoine utilization protein EutC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.196322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCATC CCGTCACGTT GCTCGGCCAC GCGCAATTGC GTGCGCTGGT GCCGCTCGAT
CTCGCCGCGA TCGACCAGGT CGAGGCCGCG TTCGCGTCGC TCGCGACCGA CGCGGTCGTG
ATGCCGCCGA TCCTGAATCT CGCGCTGCCG GCGCGCCACG CCGAAGTGGA CGTGAAGACC
GCGTACCTGC CGCGCTTCGA CAGCTTCGCG ATCAAGGTCA GCCCCGGTTT CTTCGATAAC
CCGTCGCTCG GGTTGCCGAG CCTGAACGGG TTGATGCTCG TGCTATCGGC GCGTACCGGC
CTGACCGAGG CCGTACTGCT CGACAACGGC TACCTGACGG CCGTGCGCAC CGCGGCGGCC
GGCGCCGTGG CTGCGCGCCG GCTCGCGCGC GCCGATGCTC GCCGTGCGGC GATCGTCGGC
GCGGGCGAGC AGGCCCGGCT GCAACTCGCC GCGCTGATGC TGGTGCGCGA CATCACGCAC
GTGACGGTGT GGGCCCGCGA CACCGCGCGA GCCGCGCAAT TCGCGGCTGA CGTGCGCGCG
GCGCACGGTG TCGATGCGAC GGTCGCGCGC TCGGTGCACG CGGCGCTGGC CGACGCGGAC
ATCGCGGTGA CGACTACGCC GAGCCGCGCG CCGCTCGTGC ACGCGGAAGA CCTGCATCCC
GGGCTGCACG TGACGGCGAT GGGCTCGGAC GCCGATTACA AGACCGAACT CGCGCCGTCG
GTGTTCGGCG CCGCACGGTA TTTCTGCGAC CGGCTGCAGC AGACCCGCGT GGCCGGCGAA
CTCGCGCATG CGATCGCGGC CGGGGCCGTT GCAGCCGACG CCGTGTTTCC CGAACTCGGC
GAAGTGATCG CCGGCCGCCG CGACGGCCGC ACGCATCGCG ACGACATCAC GATCTGCGAC
CTGACCGGCA CCGGCGCGCA GGACACCGCG ATTGCCGTGC TCGCGCTGCA GCGCGCCCGC
GCGGCGGAAG TGGGCACGAT TTTCCACAAC GACCTCACGA CTTGA
|
|---|
| Protein sequence | MAHPVTLLGH AQLRALVPLD LAAIDQVEAA FASLATDAVV MPPILNLALP ARHAEVDVKT
AYLPRFDSFA IKVSPGFFDN PSLGLPSLNG LMLVLSARTG LTEAVLLDNG YLTAVRTAAA
GAVAARRLAR ADARRAAIVG AGEQARLQLA ALMLVRDITH VTVWARDTAR AAQFAADVRA
AHGVDATVAR SVHAALADAD IAVTTTPSRA PLVHAEDLHP GLHVTAMGSD ADYKTELAPS
VFGAARYFCD RLQQTRVAGE LAHAIAAGAV AADAVFPELG EVIAGRRDGR THRDDITICD
LTGTGAQDTA IAVLALQRAR AAEVGTIFHN DLTT
|
|---|
| |