| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6140 |
|---|
| Symbol | |
|---|
| ID | 4454521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 295486 |
|---|
| End bp | 297339 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639698200 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_839765 |
|---|
| Protein GI | 116686518 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.660679 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTCGT GGTTTGAACG GCGCCTGCCG ACTTTCCCGC TCGAAGATCC CGTCACGCCG
CCGAAGGGAT TCTTCTCGTT CGTCTGGGCG TGCACGAAAG GCGCGCGCGG CTGGCTCCTG
CTGATCGCGC TGACGTCGGC CGCGCTGGCC GCGTACGAAG CCGCGCTGTT CGCGATGATG
GGGCACGTGG TCGACTGGCT GTCGTCGTCG ACGCCGTCCG AATTCGGCGG TCGCCACTTC
GGCGCGCTCG CGGGCTTCGC GGCGATCCTC GTCGGCAGCG CGCTGTTGAT CGCACTGCAC
ACGATGGTCA AGCACCAGGT GCTCGCGATC AACTTCCCGA TGCGGTTGCG CTGGCTGTTT
CACCGGCTGA TGCTCGACCA GAGCCTGTCG TTCTATGCGA ACGAGTTCGC GGGCCGCGTG
ACGACCAAGA TCATGCAGAC CGCGCTCGCG GTGCGCGACG CGCTGTTCAT GTCGGTCGAC
GTCGTGATCG GCGTCACCGC CTACCTGATC GGCATCCTCG TGCTCGCCGC CAGCTTCGAC
TGGCGGCTGA TGATTCCGCT CGCGCTGTGG GCGCTCGGCT ACGGCGCGGC ATGCGCGTAT
TTCGTGCCGC GCCTGGGCGC GGTCGGCAGC CGGCAGGCCG ACGCCCGCGC GCTGATGACG
GGCCGCATCA CCGACGCGTA TTCGAACATC ACGACCGTGA AGCTGTTCTC GCATACGCGA
CGCGAAGCCG ACCACGCGCG GCGCGCGATG GAAGCGTTCA AGGCGACCGG CGACGCGCAG
ATGCGGCTCG TCAGCGCGTT CGAGATCGTC AACCACCTGC TGTCGACGCT GCTGCTGATC
GGCTCGGCCG GGCTCGCCCT CGTGCTGTGG ATGCACGGCG AGGCGAGCGC GGGCGTCGTT
GCGGCCGTGA TCGCGATGGC GCTGCGTTTG TCGAGCTACT CGCACTGGAT CATGTGGGAA
ATGACCGAGC TGTTCGAGAA CGTCGGCACG ATCCAGGACG GCATCAACAC GCTGACGAAG
GTGCGCAGCG TGATCGACGC GCCCGATGCG AAGCCGCTCA CGGTGCGGCG CGGCGAAATC
GTGTTCGACA ACGTGCAGTT CGCGCACGAG GACAACGATC GCGCGGTATT CGACGGGCTG
AACCTGACGA TCCGCCCGGG CGAGCGAATC GGCCTGATCG GCCGCTCGGG CGCCGGCAAG
TCGACGCTCG TGAACCTGCT GCTGCGTTTC TACGACGTCG GCGGCGGCTC GATCCGGATC
GACGGGCAGG ACATCGCGCA CGTGACGCAG GACAGCCTGC GCGCCGCGAT CGGGATGGTC
ACGCAGGATA CGTCGCTGCT GCACCGGACG ATGCGCGAGA ACCTGCTGTA CGGCCGCCCC
GACGCGACCG AGCGCGAGAT GCAGGATGCG GCCGTGCGCG CGGAGGCGTC CGAGTTCATC
GGCCGGCTGC GCGACCGCCA CGGCCGCAGC GGCTACGACG TCGAAGTCGG CGAGCGCGGC
GTGAAGCTGT CGGGCGGCCA GCGGCAGCGC GTCGCGATCG CGCGCGTGAT GCTCAAGGAT
GCGCCGATCC TCGTGCTCGA CGAGGCGACC AGCGCGCTCG ATTCCGAGGT CGAGGTCGCG
ATCCAGCGCA GCCTCGACAC CCTGATGAGC GGCAAGACGG TGATCGCGAT CGCGCACCGG
CTGTCGACGA TCGCCGCGAT GGACCGGCTG ATCGTGCTCG ACGAAGGGCG CATCGTCGAG
GAAGGCACGC ACCAGCAGTT GCTGCAGGCG GGCGGCATTT ACGCGGCGCT GTGGGCGCAC
CAGAGCGGCG GGTTCCTCGG CGAGACGGCG GACGCGGAAA GCGTGGCGCA GTAG
|
|---|
| Protein sequence | MYSWFERRLP TFPLEDPVTP PKGFFSFVWA CTKGARGWLL LIALTSAALA AYEAALFAMM
GHVVDWLSSS TPSEFGGRHF GALAGFAAIL VGSALLIALH TMVKHQVLAI NFPMRLRWLF
HRLMLDQSLS FYANEFAGRV TTKIMQTALA VRDALFMSVD VVIGVTAYLI GILVLAASFD
WRLMIPLALW ALGYGAACAY FVPRLGAVGS RQADARALMT GRITDAYSNI TTVKLFSHTR
READHARRAM EAFKATGDAQ MRLVSAFEIV NHLLSTLLLI GSAGLALVLW MHGEASAGVV
AAVIAMALRL SSYSHWIMWE MTELFENVGT IQDGINTLTK VRSVIDAPDA KPLTVRRGEI
VFDNVQFAHE DNDRAVFDGL NLTIRPGERI GLIGRSGAGK STLVNLLLRF YDVGGGSIRI
DGQDIAHVTQ DSLRAAIGMV TQDTSLLHRT MRENLLYGRP DATEREMQDA AVRAEASEFI
GRLRDRHGRS GYDVEVGERG VKLSGGQRQR VAIARVMLKD APILVLDEAT SALDSEVEVA
IQRSLDTLMS GKTVIAIAHR LSTIAAMDRL IVLDEGRIVE EGTHQQLLQA GGIYAALWAH
QSGGFLGETA DAESVAQ
|
|---|
| |