| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6077 |
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| Symbol | ampC |
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| ID | 4454387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 226265 |
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| End bp | 227434 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639698137 |
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| Product | beta-lactamase |
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| Protein accession | YP_839702 |
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| Protein GI | 116686455 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.140978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCA ATGCGACACG CGTCGCCGCG ACCCTGTTCG TCGCCGCATG CGCGACCGCC
ACGGCCGGTA GCGCGGCCGC CGTCACGCAG GACGACCTCC ACGACACTGT CACGCGCCAT
ATCGCTCCGT TGATGAAGCA GTATGCGATC CCCGGCATGG CGATCGGCAT CGTCGCCGAC
GGCAAGCCGC AGGTGTTCGA CTACGGCGTG ATGTCGAAGC AGACCGGCAA GCCGGTGACC
GGCGACACGC TGTTCGAGAT CGGCTCGGTC AGCAAGACGC TGACCGCGAC GCTCGCCGCG
GACGCGCAAG AGGGCGGCGA ACTGTCGCTC GCGGACCCGG TGGCCAGATA TCTGCCCGAG
TTGCAGGGCA AGCCGTTCGG CGTCGTCACG CTGCTTCAGC TCGGCACGCA CACGCCCGGC
GGGACGCCGC TGCAGGTGCC GGACAGCATT CGCGACGATG CGGGTCTGAT CCGCTATCTC
GATGCGTGGC GGCCCGAGTA TGCGCCGGGC ACGCACCGCA AGTATTCGAA CGTCGCGATC
GGCATGCTCG GCTGGCTCAC CGCGAAGGCG ATGCACGAGG ATTTCGCGAC GCTGATGGAG
CAGCGGCTCT TTCCCGCGCT CGGGATGACG CACACGACCA TCGACGTGCC CGCCGCGCGC
ATGACCGACT ATGCGCAGGG CTACACGAAG GACGGCAAGC CGGTGCGGAT GTCGCAAGGC
ATGCTGTGGC AGCCGGCGTA CGGCGTGCGG ACCACGGCGG CCGACCTGCT GCGCTTCGTG
CAGGCGAACC TGGGGATGAT CCAGACGGCG CCGCGCCTGC AGCGCGCGAT CGAACGTACG
CACACCGGCT ATTTCCGCGC GGGGCCGCTG ACGCAGGACT TGATCTGGGA ACAGTATCCG
TACCCGGTCG CATTGCCGAC GCTGCTGGCG GGCAACGCGC CGAAGATGCT GTTCGACGCG
GTGCCGGCCA GCGCGATCCA GCCGCCGCTC GCGCCGAACC CCGCGACCTG GATCAACAAG
ACGGGCTCGA CCGGCGGCTT CAGCACGTAC GTCGCGTTCG TTCCCGCGAA GCGGATCGGG
ATTGTGATGC TCGCGAACGG CAACGTGCCG ATCGAGGACC GCGTGAAGGT CGCCTACCGG
ATTCTCGGGT CGCTCGGCGA CGGGCGGTGA
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| Protein sequence | MRFNATRVAA TLFVAACATA TAGSAAAVTQ DDLHDTVTRH IAPLMKQYAI PGMAIGIVAD
GKPQVFDYGV MSKQTGKPVT GDTLFEIGSV SKTLTATLAA DAQEGGELSL ADPVARYLPE
LQGKPFGVVT LLQLGTHTPG GTPLQVPDSI RDDAGLIRYL DAWRPEYAPG THRKYSNVAI
GMLGWLTAKA MHEDFATLME QRLFPALGMT HTTIDVPAAR MTDYAQGYTK DGKPVRMSQG
MLWQPAYGVR TTAADLLRFV QANLGMIQTA PRLQRAIERT HTGYFRAGPL TQDLIWEQYP
YPVALPTLLA GNAPKMLFDA VPASAIQPPL APNPATWINK TGSTGGFSTY VAFVPAKRIG
IVMLANGNVP IEDRVKVAYR ILGSLGDGR
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