Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6040 |
Symbol | |
ID | 4454246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 188624 |
End bp | 189502 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639698100 |
Product | LysR family transcriptional regulator |
Protein accession | YP_839665 |
Protein GI | 116686418 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.061034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCC CCCTCGACAC GGCGCTGCTT CATACGTTCG TCGCGGTCGC CGACGTGCGC AGCTTCACCG GCGCCGGGCG CCGGCTGAAC CTCAGCCAGT CCGCGGTCAG CGCGCAGATC GTTCGCCTCG AAGAACAGGT CGGCCAGGCG CTGCTCGCGC GCAACACGCG CAGCGTCACG CTCACCGGGC ATGGCGAGAC GCTGCTCGGC TACGCGCGCG CGATGCTCAA TCTGAGCGAG GAAGCGCGCG CCAGGCTGGG AACGGGTGAC GCCATCGACG TCAAGCTGCG GATCGGTGTA TCGGAGGACT TCGCAACTGG CTGGCTGCCG GACCTGATGC GCCGTCACGG CGCCGCGCGG CGCGGCCTGC GGCTGGATCT GGTCGTCGAC ATCGGCGACA GCCTGTTTCA ACGGCACGCC AACGGCGAAT TCGATCTCGT GATCGGCAGC CGGTGCTCGC ACGCGGGCCA CGGCGCGACG TTGTGGCAGG AACCGCTCGT CTGGGCGTTC GCGCGCCACG AGCCGCTTCC GGAAGGCGAC GTGCCGCTCG CGTGCTTCCC CGATCCGTGC CCGTACCGCG GCGCCGCCAT CAAGGTGCTC GCGCTGGCCG GCATGCGCTA CCGGATCGCA TGCGAAAGCC CGAGCGTGGC CGGCATCCGG ACCTTCGCGC GGGCCGGCAT CGCGATCGCG CCGGTGCCGC GCAGCGCGAT CGACGACACG CTTCGCGAAT TGGGTTTGCC CGAAGGCTTG CCGGAATTGC CGGCGATGGA ATTCGTGATG ATGCACGATG CGCGGATGCC GGCGGCCGCC GAATTCGCCG CGATGATTCT GGACGAGACG GCTGCCCGCA CGGGCGCGGG CAAGCGCGGC CGTGCGTAG
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Protein sequence | MNAPLDTALL HTFVAVADVR SFTGAGRRLN LSQSAVSAQI VRLEEQVGQA LLARNTRSVT LTGHGETLLG YARAMLNLSE EARARLGTGD AIDVKLRIGV SEDFATGWLP DLMRRHGAAR RGLRLDLVVD IGDSLFQRHA NGEFDLVIGS RCSHAGHGAT LWQEPLVWAF ARHEPLPEGD VPLACFPDPC PYRGAAIKVL ALAGMRYRIA CESPSVAGIR TFARAGIAIA PVPRSAIDDT LRELGLPEGL PELPAMEFVM MHDARMPAAA EFAAMILDET AARTGAGKRG RA
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