Gene Bcen2424_5921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5921 
Symbol 
ID4454633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp52545 
End bp53519 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID639697982 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_839547 
Protein GI116686300 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGA CCCGCAACAC GACCGGCTGG CTCGCCGTGC GCCGCGAGCT GACGACGCGC 
GGCAAATGGA CGCTCGCGCT GGCGTCCTTC CTGCTGCCGT TCGCCGTCTG GTGCCTGATC
AGTTATGTGC CGTTCGTCTG GCATCCGCAG ATGCGCATCA CGAACCCGGG CAGCGTCGAC
TATTTCCAGA CCGGGATGCA GATCGACCGC GACGTGTTCG ACGACGAGCT CGCGCATGCG
CGTGCGACGC ACGCGGCGGT GCCCGAGGGC GAGCGCGCGA ATCCGGTCTA CCTGCCGGCG
CCGCACCAGG TCTTGCGCGC GTTCTACACG GCGTTCACGA CACCGCCCGC GTCGCGCGAT
GGCGTGTGGC TGCACGAAAG CCTGTGGCAC AGCATCCGCA TCATCTTCTG GGGCTTCGTG
ATTTCGTCCG CGATCGGCGT GCCGCTCGGC ATCGTCTGCG GCACCTTCAG TGCGCTCGCG
CGGCTGCAGG AGCCGTTCCT GGAGTTCTTC CGCTACCTGC CGGCGCCGGC GTTCGGCGCG
CTGATGGTCG CGATTCTCGG CATCTATGAC GCGCCGAAGA TCGCGATCAT CGTGATCGGT
ACGCTGTTCC AGCAGGTGCT GATCATCGCG AACACCACGC GCAAGCTCGA ATACGGGCTG
TTCGAGGCCG CGATGACGCT CGGCACGAAG AAGCTGAAGC TGCTCACGCA CGTCGTGATT
CCGGGCGTGC TGCCGGACCT GTATCGCGAT CAGCGCATCC TGCTCGGCTG GGCGTGGACT
TACCTGATCG TCGCCGAGCT GGTCGGCACG AGCTCGGGCA TCACGTGGTA CATCAGCCAG
CAGGCGCGCT ATCAGCATTT CGACAACGTA TATGCGGCGA TCCTGATGAT CGGGATCATC
GGCCTCGGCA CCGACATCGT GCTCGGGCTG CTCGGCCGCC GGCTCTTTCC GTGGGACCGC
ACGCTGAAAG CGTGA
 
Protein sequence
MTTTRNTTGW LAVRRELTTR GKWTLALASF LLPFAVWCLI SYVPFVWHPQ MRITNPGSVD 
YFQTGMQIDR DVFDDELAHA RATHAAVPEG ERANPVYLPA PHQVLRAFYT AFTTPPASRD
GVWLHESLWH SIRIIFWGFV ISSAIGVPLG IVCGTFSALA RLQEPFLEFF RYLPAPAFGA
LMVAILGIYD APKIAIIVIG TLFQQVLIIA NTTRKLEYGL FEAAMTLGTK KLKLLTHVVI
PGVLPDLYRD QRILLGWAWT YLIVAELVGT SSGITWYISQ QARYQHFDNV YAAILMIGII
GLGTDIVLGL LGRRLFPWDR TLKA