Gene Bcen2424_5920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5920 
Symbol 
ID4454632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp51588 
End bp52499 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID639697981 
ProductABC transporter related 
Protein accessionYP_839546 
Protein GI116686299 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACC CGCAAGCCGT TCCCGATTAC CTGATTCAAT CCGACGCGGT GCGCGAGCGC 
TTCGCGCGGC TGAAGGCCCG CGACGTGATA CTCGACGTGC GACACGTCGG CAAGCGTTTC
ACGACGCCGC AGGGCGAGTG CGTCGCGCTC GACGACATCA GTTTCCGCAC GCACCGGCGC
GAGTTCGTGT GCGTGATCGG CCCGTCCGGC TGCGGCAAGT CGACGTTGAT CCGGATTCTC
GCCGGGCTCG ACGCGCAGAC GAGCGGCGAC GTGCTGCTGG ACGGCAAGCC GGTCGACGGG
CCGGGCGCCG ATCGCGGAAT GGTGTTCCAG GGCTATACGC TGTTTCCGTG GCTCACGGTG
AAGAAGAACG TGATGTTCGG CCTGCGCATG AACGGCAGCA GCAGCGGCGT GGCCGAGCGT
GAGGCGCTGC AGTGGCTCGA TCTCGTCGGG CTGACGCGTT TCGCCGACGT GTATCCGCAC
CAGCTGTCGG GCGGCATGAA GCAGCGCGTG GCGATTGCCC GCGCGCTCGC GAACCGTCCG
CGCATCCTGC TGATGGACGA ACCGTTCGGC GCGCTGGACG CCCAGACGCG GGCCAGGATG
CAGACGCATC TGCTCGACAT CTGGCGCAAC ATCGACGTGA CGATCCTGTT CATCACGCAC
GACCTCGACG AGGCGATCTT TCTGGCCGAC CGGATTCTGG TGCTGAAGGC GAACCCGGGC
GGGGTGCAGG AGCTGATCGA GGTGCCGGTG CCGCGGCCGC GCGATTATTC GCAGGTCAAT
ACGCCGGAGT TCGTCGCGAC GAAGGCGCGT CTCGAAGCGC TGATTCACCC GAAGGAGGCC
GCGACTGCCG AGGACGACGG CATCAAGCCG CACATGATCC GGATGACGGA CGTGGCTGAT
AACGTCGAAT AG
 
Protein sequence
MQNPQAVPDY LIQSDAVRER FARLKARDVI LDVRHVGKRF TTPQGECVAL DDISFRTHRR 
EFVCVIGPSG CGKSTLIRIL AGLDAQTSGD VLLDGKPVDG PGADRGMVFQ GYTLFPWLTV
KKNVMFGLRM NGSSSGVAER EALQWLDLVG LTRFADVYPH QLSGGMKQRV AIARALANRP
RILLMDEPFG ALDAQTRARM QTHLLDIWRN IDVTILFITH DLDEAIFLAD RILVLKANPG
GVQELIEVPV PRPRDYSQVN TPEFVATKAR LEALIHPKEA ATAEDDGIKP HMIRMTDVAD
NVE