| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5896 |
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| Symbol | |
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| ID | 4454608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 27091 |
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| End bp | 27927 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639697957 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_839522 |
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| Protein GI | 116686275 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.684807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.6752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCG ACCAATACGC GGTGATCGGC AATCCGATCG GACACACCAA ATCCCCGCTG
ATTCACGGCC TCTTCGCGCA AGAGACGCAG CAGGACCTCC GCTACACGGC GATCGAGGGC
CCGCTCGAGC CGGCAGGCGC TTTTGCTGCC ACTGTTCGTG CGTTTTTCGA CGGCGGCGGC
AAGGGCATCA ACGTCACCGC GCCGTTCAAG CTCGACGCAT TCGCGATGTC GGACGAACGC
AGCGAGCGGG CGCAGCTCGC GGGCGCGGCC AACGCGCTCA AGTTCGACGG CGGCCGCATC
CTGGCGGACA ACTTCGACGG CATCGGGCTG GTTCGCGATA TCGAGGCGAA CCTCAATCTG
CCGATGGCCG GCAAGCGCGT GCTGGTGCTC GGTGCGGGCG GCGCAGCGCG CGGCGCGCTG
CTGCCGTTTC TCGACGCCGG CCCGGCGGAA CTCGTGATCG CGAATCGCGA CGTCGACAAG
GCGCGCTTGC TGGCCGCGCA GGTCGCCGGT CGCGGCCCTC TGGTTGCCGG CAGCTATGCC
GACCTCGCGC GGATGGGACG TTTCGATCTG GTCGTCAACG CGACGTCGGC CAGTTTGACC
GGCGATCTGC CGCCTGTCCC GCCGAGCGTG TTCAGTCCGA CGGGAACCGC CTACGAACTC
GCCTATGGCA AGCGGCTCAC GCCGTTTCTC CGGCTCGCTA AAAACGCGGG CGTGCACGGG
ATCGCGGATG GTGTCGGCAT GCTGGTCGAG CAAGCGGCCG AGGCGTTCGC ATGGTGGCGC
GGCGTGCGGC CCGCGACCAG CGCGGTGATC GACCGGCTGG CCGTGCCGTT CGACTGA
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| Protein sequence | MMTDQYAVIG NPIGHTKSPL IHGLFAQETQ QDLRYTAIEG PLEPAGAFAA TVRAFFDGGG
KGINVTAPFK LDAFAMSDER SERAQLAGAA NALKFDGGRI LADNFDGIGL VRDIEANLNL
PMAGKRVLVL GAGGAARGAL LPFLDAGPAE LVIANRDVDK ARLLAAQVAG RGPLVAGSYA
DLARMGRFDL VVNATSASLT GDLPPVPPSV FSPTGTAYEL AYGKRLTPFL RLAKNAGVHG
IADGVGMLVE QAAEAFAWWR GVRPATSAVI DRLAVPFD
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