Gene Bcen2424_5879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5879 
Symbol 
ID4454591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp11224 
End bp12492 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content69% 
IMG OID639697940 
Productphosphoribosylglycinamide synthetase 
Protein accessionYP_839505 
Protein GI116686258 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.521142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.293972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCATC GCTTCATCGA TACCGTCCTG ATCGTCGACG GCGCGTCGAC CGCCGCCTAC 
CTGGCCCCCG CGTTTCGTGC ATACGGCATT CGTTGCGCGC ATGTGATCAG CGACCCCGAT
CTGCCGGAAA TCTACCGGAA CCAGTTCGTG CCATCCGACT ACATCCGCCA GGTCCAGCAT
CGCGGCGACA TCGACGCGAC ACTCGCGCAA CTGAGCGATC TGCGGATCGG CGCCGTGCTG
CACGGCCTCG ATGCGGCGCT GGAGCTGGCC GACACGCTGG CCGAGCGGCT CGACGTGCCG
TCACGCAACC CGCTCGCGAC CTCCGCCGCG CGGCGCGACA AGTTCGCGAT GAACGAACGC
ATTCGCCAGG CCGGGCTGCG CGCGCCGGCG CACTTTCACA GCACGTCGGT CGATGAGGCG
CTCGATTGGG CACGCGCGCA CGGCACGCTG CCGCTCGTCG TGAAGCCGGC GCGCAGCGCG
GGCGTGGCCG GCGTGAAGAT CTGCCGGACG CTCGCGCAGG TCGAGGCCGC CGCGCGCGAC
GTGCTGGCCA CCCGTTCGCT GTACAACCAG CCGAACGACG ACATCGTGAT CCAGAGCTAT
TCCGAGGGGC AGGAATACAT CGTCGACTCG GTATCGTTCG AAGGCCGGCA CCGCGTGGTC
AGCCTGTGGG AAGTGCATCG CGACCGCACG CACGCGCCGC GGCTCGACAA GATGCTGGTG
CTGAACCACG CCGACCCGCG CTACGCCCCG CTGCTCGACT ACGCGGCCAA CGTGCTCGAC
GCGCTCGACG TGCGTTTCGG GCCGACCCAC CTGGAGCTGT TCGATACGGC CGACGGCCCG
ACGATCGTCG AGCTGAACGC CCGGCTGCAC GGCAGCCTCG ATCCGCGGCT GACGAGTGCG
GTCAGCGGCG AGAATCACGT GTCGGCCGCC GTCGAAGCGG TGCTGCATCC GGAGCGGCTG
TTCGGCGACG TCACCGCGCC GACGGATTTT CGCGGGTACT GCGGGCACGT GCTGCTGCTG
TCGTCGCGCA ACGGCGTGCT GCGGCAGGAT TTCACGTGGC AGGCGATCCA GGCGCTGCCG
TCGTTCGTCG GGCTCAAGCA GTGGATCAAG GTCGGCGACA CGCTGCGCGT GACCACCGAC
CTGCAGACCG CGCTCGGCAC GGTCGGCCTG TACAGCCCGA CCTTCGAGCG GCTGCTCGAG
GATTGCCGGC GGATTCGCGA GATCGAGGCC GATTTCTTCG CGGACGAAGG CGCGGTTGCG
CCGGCCTAG
 
Protein sequence
MQHRFIDTVL IVDGASTAAY LAPAFRAYGI RCAHVISDPD LPEIYRNQFV PSDYIRQVQH 
RGDIDATLAQ LSDLRIGAVL HGLDAALELA DTLAERLDVP SRNPLATSAA RRDKFAMNER
IRQAGLRAPA HFHSTSVDEA LDWARAHGTL PLVVKPARSA GVAGVKICRT LAQVEAAARD
VLATRSLYNQ PNDDIVIQSY SEGQEYIVDS VSFEGRHRVV SLWEVHRDRT HAPRLDKMLV
LNHADPRYAP LLDYAANVLD ALDVRFGPTH LELFDTADGP TIVELNARLH GSLDPRLTSA
VSGENHVSAA VEAVLHPERL FGDVTAPTDF RGYCGHVLLL SSRNGVLRQD FTWQAIQALP
SFVGLKQWIK VGDTLRVTTD LQTALGTVGL YSPTFERLLE DCRRIREIEA DFFADEGAVA
PA