| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5731 |
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| Symbol | |
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| ID | 4452579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2854646 |
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| End bp | 2857150 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639697792 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_839357 |
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| Protein GI | 116693824 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.611211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC TGGCGGCATT CATTCGAACC CCGTTTTTCC AGCAAGACAA ACGCCTGCTC
GCGCTGTCTT TCCCCCACGA CGACGCGCCG TCGGTGACCG ACTCGTACGG GCGGCAACGT
CCGGCGCGGC TGGTGGCCGA GCGTCTCGTC GCGCACGAGG GGCTCGGGAT CGATTTCACG
TTCGAGGTGA CGCTGTTGTC GGGCGAGGCG GGCGTCACGC TGGCCGACAT GCTGGGCAAG
CTGCTCGCGG TGTCGATGGT GCGCCCCGAC GGCGGCCTGC GTTATTTCAC CGGTTACTGC
ACCGAGTTTT CGCTGGTCCG CAACGACGAT TCGATCGCGG AATATCGCGC GGTGCTGCGC
CCGTGGAGTC ACTTCCTGCG GACCCGCGTG AACAACCGCC TGTTCCTCGG CCAATCGCTG
CAGCAGCAGA TCGGCACGCT GCTCGCCGAC TATCAGGGGC TCGCGCCGTC GTGGGAGTGG
CGCGTGCGCG GCGACGATCC GGCACGCACG ATGAACGTCC AGGGCGGGGG GCTCGGCGAA
AGCGACTGGA ACTACATCGT TCGCCATCTG GAAGCCGTCG GGTTCCTGTA CTGGTGGGAG
CATGACGAGA AAGGCGTGAA GCTGATCGTC GGCGACGACA GCACGGTGCA GTGCCCGGCC
GTCGACGGCC GCTCGCCGCA GATCCGCTTC CAGACGCACG ACGGCCCGAT GGCCGCCGAC
GCCATTTCGC AATGGTCCGC GGTACGGTCG CTGTCCGCCG GCAGTTACAG CGCGACGGCG
TTCGACTTCA AGGCGCCGCA TGCGGCCCAC GCGCAGATTC CGACGCTGCA TCCGCCGGGT
GTCGCGCCGC AGGTCGAGCA TCATGAATAC GTGGGGCACT ACGGCTTCGC GAAGCAGACG
CGCGCCGGCG ACGCGCTCGC GCGTGTGCGG ATGGAAGAGA TCGAGGCGGC CGCGACGCGT
TTCGACGCGG CCGGCAATCA TCACGGCATC CTGCCCGGGC GCTGGTTCCA GCTGTCCGAT
CACTTCAGCG TGGCGTCGGG CAGCCCGCAG GATCACGAGT ACCTGATTCT CGAAGCCCGT
CACGAAGCGG CGAACAATTA CCTGCAGGCC GACGGCAAGC CCGAGTATCG CAACCGCTTC
GTCGCGGGCC ATCGACGTAC GCCGTGGCGA CCGGGGCGCG GGTTCAACAG CGAACCGGTG
CGCGTGCTGG CGCCGCAAAC CGCGACCGTT GCCGGCGCGA AGGGAGCCGG CAGCGTCGAC
GTCGACGAGT ACGGGCGCGT CTGCATCGTC TATCACTGGG ATCGGGCGGC GCAGATCAGC
GCGCGGATTC GTGTGGCCGC CGGCTGGGCG GGCGGCGAGA AGGGCATGAT CGCGCATCCG
CGCGTGGGCA GCGAGGTGCT CGTGATGTGC CTCGACGGCA ATCCCGACCG GCCCGTCGTG
TCGGGCACCA CGTACAACGC GGAACGGATG CCGCCGTGGG CGCTGCCCGA CCAGCACGTG
CTGACCGGCC TGCGCAGTCG CGAGCTGTCG GGCGACGGCG GCAATGCGGC GGGCGGACGC
TCGAACCACG TGCTGCTCGA CGACACGCCG CAGCAGCTCC AGCTGAAGCT GCGCAGCGAT
ACCGACGCGA GCGAACTGAC GCTCGGGCAC AACGTCCGCA TCGACGCGAC CCAGGGGCGC
ACCGATCAGC GCGCCCGCGG CTTCGAATTG CGGACCGACG CGCATGGCGC GGTACGGGCG
GCCAAGGGCC TGCTCGTGAC CAGCGAGGCG CGCTACGACG CGCGTGCCCA TGCGACCGAC
ATCGGCGAGA CCGTCGCGCG CCTCGACAAG GCGCACGACC TGCACGAATC GTTGTCGGGG
TCCGCGCACG ACGTGAAGGC GCAGGAGTCC GGCGATCAGG ATGCCGTCCA TCAGGCGCTC
AGGACGCAGA ACGACGGCCT GAGGGGCAGC GGCGGCAATC CGCAGCAGGG CGAGTTTCCG
GAGTTCGCGC AGCCGTTCCT CGCGCTCGCG AGCCCGGCGG GGATTCTGGC GACGACGACG
GGGTCGACCC ATGTCGCGAG CGACCAGCAC GTCGCGTTGA CGAGCGGCGC CCACACGAGC
ATCGGCGCGG GCAAGAGCAT GCTGGTCAGC GCGCAGGAGG CGGTGCGCGT CGCCGCGTTC
GAGAAGGGCA TCCGGCTCGT GGCCGCCGCG GCCGACATCG ACATCCAGGC GCTCAAGGAC
AGCGTCAACG TGCTCGCCAA GCTGGACGTG AAGGTCGATG CGAACCGCAT CACCATCACC
GCGAAAGAAG AAGTCCTGAT CAACGGCGGG ACCAGCTATA CGCGCTGGAA CGGCAGCGGC
ATCGTGCACG GGACCAAGGG CGAATTCACC GCGCATGCGG CGTCACATAC GTTCATCGGG
CCGGACAGCC TGCCGGTGCC CGCGCGCGCG TTCCCCGGCA CGGCGTGCGC GCCGTGCATG
GTCAACGCGG CATCGATGGC GTCGCCGTTC GCGGCCAAGG CGTGA
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| Protein sequence | MADLAAFIRT PFFQQDKRLL ALSFPHDDAP SVTDSYGRQR PARLVAERLV AHEGLGIDFT
FEVTLLSGEA GVTLADMLGK LLAVSMVRPD GGLRYFTGYC TEFSLVRNDD SIAEYRAVLR
PWSHFLRTRV NNRLFLGQSL QQQIGTLLAD YQGLAPSWEW RVRGDDPART MNVQGGGLGE
SDWNYIVRHL EAVGFLYWWE HDEKGVKLIV GDDSTVQCPA VDGRSPQIRF QTHDGPMAAD
AISQWSAVRS LSAGSYSATA FDFKAPHAAH AQIPTLHPPG VAPQVEHHEY VGHYGFAKQT
RAGDALARVR MEEIEAAATR FDAAGNHHGI LPGRWFQLSD HFSVASGSPQ DHEYLILEAR
HEAANNYLQA DGKPEYRNRF VAGHRRTPWR PGRGFNSEPV RVLAPQTATV AGAKGAGSVD
VDEYGRVCIV YHWDRAAQIS ARIRVAAGWA GGEKGMIAHP RVGSEVLVMC LDGNPDRPVV
SGTTYNAERM PPWALPDQHV LTGLRSRELS GDGGNAAGGR SNHVLLDDTP QQLQLKLRSD
TDASELTLGH NVRIDATQGR TDQRARGFEL RTDAHGAVRA AKGLLVTSEA RYDARAHATD
IGETVARLDK AHDLHESLSG SAHDVKAQES GDQDAVHQAL RTQNDGLRGS GGNPQQGEFP
EFAQPFLALA SPAGILATTT GSTHVASDQH VALTSGAHTS IGAGKSMLVS AQEAVRVAAF
EKGIRLVAAA ADIDIQALKD SVNVLAKLDV KVDANRITIT AKEEVLINGG TSYTRWNGSG
IVHGTKGEFT AHAASHTFIG PDSLPVPARA FPGTACAPCM VNAASMASPF AAKA
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