Gene Bcen2424_5719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5719 
Symbol 
ID4452478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2838809 
End bp2839810 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content71% 
IMG OID639697780 
ProductFHA domain-containing protein 
Protein accessionYP_839345 
Protein GI116693812 
COG category[T] Signal transduction mechanisms 
COG ID[COG3456] Uncharacterized conserved protein, contains FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.225135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.254458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATAC TCAAGAACGA CGCTTCCGGA GACGCATGCC TGCTCCGCGC GTATCACGTG 
TTCGGCCGCG ACGACGCGCG CTGCGACACG GTCATCCGGG ATGGCTCGGT GTCCCGCGTC
CATGCCCATA TCCGCTGGGT CGGCGGGCTC TGGGAACTCC ACGATCACAG CAGCAACGGC
ACGTCGGTAT CGGGCGTATC GCTGCGCGAT GGCGAGCATG CGGTGCTGCA GCAAGGCGAC
GTGATCCGCT TCGGCAGGGC CGGCACCGCG CCGTGGCGGG TCGAGTCGCT CGACGATCCG
GCCGATACGC TGTGGCCGAT TCGCGGTGCC GCCGCGCCGA TCGTGCTCGC GCCGCGCCAG
ATCCTGCCGG TGCCTGCCGC GCAGCCGGTC ACGATCGTTC GTTCGCCGGC CGGCGAATGG
CTGTGCGACG ACACGTTGCC GCCGCGCGCG CTCCATGACG GCGACGAAGT GTCGACCGGC
GACTTCGCGT GGCGTCTCGC GCTCGCGCGC CACGGCTCGA CGGTGATGCT CGCCGCCCCC
GCCGATCCGG CCGCGCCGGC GCCATTGCTC GAATTCCTCG TCAGCCGCAA CGAGGAGCAC
GTGCGCATGC TGCTGCATGT CCGCGGCGGC GTGGTCGACC TCGGCGAGCG CGCCCATCAC
TACAGCCTCG TCACGCTCGC CCGCGCCCGC TCGGCCGACA TGCAGGCCGG CTACGACGCC
GCCACGCAAG GGTGGATCGA ACTCGACCGG CTCGCGCGCA TGCTCGGCAT CGACGCGTCC
CATGTCAACG TGCAGATTCA TCGCGCGCGG AGCCAGTTCG CGGCGCTGCC GGGGCTCGGT
GCGAGCCAGC TCGTCGAGCG CCGACGCGGC AGCGTCCGTT TCGGCGATGT GCCGTTCCGG
GTGATGCGCG GCGAGCATCT CGAATGCGAG TCGGTGCCGG CCGCCGGGCC GCGTATCGGC
GTGCCGCGCG CGGTGCCGGG CCCGATCGTC CATTGCCCGT GA
 
Protein sequence
MAILKNDASG DACLLRAYHV FGRDDARCDT VIRDGSVSRV HAHIRWVGGL WELHDHSSNG 
TSVSGVSLRD GEHAVLQQGD VIRFGRAGTA PWRVESLDDP ADTLWPIRGA AAPIVLAPRQ
ILPVPAAQPV TIVRSPAGEW LCDDTLPPRA LHDGDEVSTG DFAWRLALAR HGSTVMLAAP
ADPAAPAPLL EFLVSRNEEH VRMLLHVRGG VVDLGERAHH YSLVTLARAR SADMQAGYDA
ATQGWIELDR LARMLGIDAS HVNVQIHRAR SQFAALPGLG ASQLVERRRG SVRFGDVPFR
VMRGEHLECE SVPAAGPRIG VPRAVPGPIV HCP