Gene Bcen2424_5700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5700 
Symbol 
ID4452424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2822283 
End bp2822894 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content69% 
IMG OID639697761 
ProductXRE family transcriptional regulator 
Protein accessionYP_839326 
Protein GI116693793 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00441066 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAGTT CCTCCGGATC GCGGCGCCCG GCCGCCGACG CCGCCCCGCA GCCGCCGGCC 
GCGACCCCGC CGCGTGTGGG CGAGCAGATT CAGCGCCTGC GCAACGAGCG CAAGCTGACG
CTCGATGACC TGTCGCGCGC AGCCGGCGTA TCGAAATCGA TGCTCTCCGA AATCGAACGC
GACAAGGCCA ACCCGACCAT CGCCGTGGCA TGGCGGCTGA CGAACGCGCT CGGCATCACG
CTCGACGAAT TGTTCTCGCA GCCGAAGGCG CCCGAGACGA TCCGCGTGGA CGGCCCGCAC
GACATTCCGA CGCTCGCCGG CCACGACGGC CGGTACCAGT TGCGCGTATG GGGCCCGATC
GACCTCGCCG GCAAGTTCGA GTGGTACGAA CTGACGCTGC CGGGCGGCGG CGCCCTGGTA
TCGAACGCGC ACGAACCGGG CACGCGCGAG CACCTCACCG TGCTGCAGGG CGCGATGGAA
ATCGAGGCCG CCGCGGCGAG CCGACGCCTG AAGGCGGGTG ACACCGCGCG TTACCCGGCC
GATGAGCCGC ATGCAATCCG CAATCCCGGC AAGGCCGAAG CACGGGCCTT GTTGATCGTG
ATCCATCGCT GA
 
Protein sequence
MASSSGSRRP AADAAPQPPA ATPPRVGEQI QRLRNERKLT LDDLSRAAGV SKSMLSEIER 
DKANPTIAVA WRLTNALGIT LDELFSQPKA PETIRVDGPH DIPTLAGHDG RYQLRVWGPI
DLAGKFEWYE LTLPGGGALV SNAHEPGTRE HLTVLQGAME IEAAAASRRL KAGDTARYPA
DEPHAIRNPG KAEARALLIV IHR