Gene Bcen2424_5658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5658 
Symbol 
ID4452139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2775877 
End bp2777139 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content65% 
IMG OID639697719 
Productextracellular solute-binding protein 
Protein accessionYP_839284 
Protein GI116693751 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0866592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.356633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC GCCCCCTTCG CGTCGCTGCC CGCCTGGCGA CCGCCGCCGT CGCCTTCGGC 
CTTGCGTCGC TCGCCATGAC GACGCCTGCC GATGCCGGCA CGCTGACCAT CAACATCGCG
TTCAAGGGCG CGAGCCAGCG TGCGGTGTGG CAGTCGACGA TCGAAGCGTT CCACAAGGCC
CATCCCGACA TCGACGTGAA GCCGACCTTC GTCGACGAGG AAGCGTACAA GGTGCAGCTC
CCCGCGTGGC TCACCACCGT CGCACCGGAC GTCGTGAACT GGCACGCGGG CGAGCGGATG
GCGTACTACG CGAAGCGCGG GCTGTTCGAG GACCTGAGCG GCGACTGGTC GAAGAACGGC
TGGGACGCGA TGTATGCGTC GACGCGCAGC GCGTCGTCCT ATAACGGCAA GCAGTACGCG
GCGCCGACCG TCTACTACTC GTGGGGCCTC TTCTACCGCA AGGACCTGTT CCGCAAGGTC
GGCATCGCCG ACGAACCGAA GACGTGGGAC CAGTTTCTCG ATGCATGCAA GAAGCTGAAG
GCCGCGGGCA TCACGCCGAT CGCGATCGGT GGCCGCGACG CGTGGACGCT CGCCGGCTGG
TTCGACTATC TCGACCTGCG CCTGAACGGC AACGCGTTCC ACCAGCAATT GATGGCCGGC
GACGTGCCGT ACACCGACCC GCGCGTGAAG AAGGTCTACA CGACGTGGAA ATCGCTGATC
GACTCGGGCT ACTTCATCGA CAACGCGCTG TCCTACGATC TCGACGGCGC GCAGCCGTTC
CTGTTCCAGG GCAAGGCCGC GATGATGCTG ATGGGCACCT TCATCGCGGC GGGTTTCCCG
CCGAACGTGA AGCCGGACAT GGGCTATTAC CGCTTCCCGA TCATCGATCC GAAGGTGCCG
ACCGCCGAGG ACGGCCCGGT CGAATCGCTG CACATCCCGA CCAAGGCGAA GAACAAGGCC
GACGCGCACA CGTTCCTCGC GTTCGTCGAA ACCCCCGAGA TGGGCGCGAA GCTCGCCGAA
GGGCTCGGCT CGCTGTCGGC GAACAGCAAG TCGCCCGAGC CGGCCGATCC GATCTCGCGC
ATCGGCTTCC GGATCCTCGC CGACACGAAG GGCGGCGTCG CGCAGTTCTA CGACCGCGAC
ATGACCAAGG AAATGGCCGA CGAGGGGATG AAGGGGATGC AGCAGTTCCT CGCGAATCCC
GCGCAGCTCG ATACGGTGCT CGCGCAACTC GAACAGACCC GCAAGCGGAT TTACAAGAAG
TGA
 
Protein sequence
MTHRPLRVAA RLATAAVAFG LASLAMTTPA DAGTLTINIA FKGASQRAVW QSTIEAFHKA 
HPDIDVKPTF VDEEAYKVQL PAWLTTVAPD VVNWHAGERM AYYAKRGLFE DLSGDWSKNG
WDAMYASTRS ASSYNGKQYA APTVYYSWGL FYRKDLFRKV GIADEPKTWD QFLDACKKLK
AAGITPIAIG GRDAWTLAGW FDYLDLRLNG NAFHQQLMAG DVPYTDPRVK KVYTTWKSLI
DSGYFIDNAL SYDLDGAQPF LFQGKAAMML MGTFIAAGFP PNVKPDMGYY RFPIIDPKVP
TAEDGPVESL HIPTKAKNKA DAHTFLAFVE TPEMGAKLAE GLGSLSANSK SPEPADPISR
IGFRILADTK GGVAQFYDRD MTKEMADEGM KGMQQFLANP AQLDTVLAQL EQTRKRIYKK