Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5616 |
Symbol | |
ID | 4451924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2727834 |
End bp | 2728571 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639697677 |
Product | histidine utilization repressor |
Protein accession | YP_839242 |
Protein GI | 116693709 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.321981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0803951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACCA AGGCCACCGC ACCGTTCCAG CAGATCAAGA CGCTCGTCCG TCAGAACGTC GAGTCCGGCG ACTGGCGCCC CGGCGACCGC ATTCCGTCCG AGCTCGATCT CGCCGCGCAG TTCGGCGTCG CACGCATGAC GGTCAACCGC GCGCTGCGTG AGCTGACCGA GGAAGGCGTG CTCAAGCGCA CCGCAGGCGT CGGCACCTTC GTCGCCGAGG TGAAGCCGCA GTCGAACCTG CTGATGATCG CGCACATCCG CGACGAAATC CGCGCGCGCG GGCACGAATA TCGCTGCCGC GTGCTGAGCC AGTCGAGCGA ACCCGCGTCG TTCGACGTCG CGGCCGCGTT CGGCCTGCCG GTCAACACGC CGGTCTTTCA CGTGGTGTGC GTGCACGAGG AAAACGGCCG CCCGATTCAG CTCGAGGATC GCTACGTGAA CCCGGCCGCC GCGCCCGGCT TCATCGACCA GGATTTCCAG ACCGAGCCGC CGTCCGAGTA CCTGTACAAC AACGTGTCGC ACTACGAACT TGAAATCGAG CACGTCGTCG ACGCGTCGCT GCCCACCAGC GAGCAGGCGC GGCTGCTCGA CATGCGCGCC GACGAGCCGT GCCTGACGCT CACGCGCCGC ACATGGACGG ACGGGCTGCC CGTCACGTTC GTGCACTTCC TGCATCCGGG CAACCGCTAC CGGCTCGGTT CGCGCTTCAA GCCAGGCGCG GGGCGCCACC CGACCTGA
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Protein sequence | MVTKATAPFQ QIKTLVRQNV ESGDWRPGDR IPSELDLAAQ FGVARMTVNR ALRELTEEGV LKRTAGVGTF VAEVKPQSNL LMIAHIRDEI RARGHEYRCR VLSQSSEPAS FDVAAAFGLP VNTPVFHVVC VHEENGRPIQ LEDRYVNPAA APGFIDQDFQ TEPPSEYLYN NVSHYELEIE HVVDASLPTS EQARLLDMRA DEPCLTLTRR TWTDGLPVTF VHFLHPGNRY RLGSRFKPGA GRHPT
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