Gene Bcen2424_5615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5615 
Symbol 
ID4451923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2727250 
End bp2727792 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID639697676 
ProductXRE family transcriptional regulator 
Protein accessionYP_839241 
Protein GI116693708 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.322287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0794813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC GCCTGAAGCT GCTCAGAAAA CAGAAGGGCT GGACGCTCGA CGTGCTGGCC 
GACGAGACCG GCCTCACCAA GAGCTACCTG TCGAAGGTCG AGCGCGGCCT GAGCGTGCCG
TCGATCGCGG TCGCGCTGAA GCTGTCGAAG GCGCTGAACG TCGACGTCGA GCAACTGTTC
TCGGAAAGCC GCAACCGCGA ACTGATCACG GTCACGCGCG CCGGCGAGCG CACGGCAATG
GGGGCGGCGG CCGACAGCCA CGCGCATCGC TTCGAAAGCA TCGCAGCGGG CGTCGCGCCG
AAGAAAATGC TGCCGTTCGT CGTGCATCCG CCGCACGAAT TCGTCGCATC GACGTTCCGC
GAGCACGAGG GCGAGGAATT CCTGTTCGTA CACAAGGGAC GCATCGAAAT CGAATTTCCG
AACGAGACGG TGCAACTCAA GGCCGGCGAT TCAGTCTATT TCAACGCACT GATCCCGCAC
CGCACGCGCA GCCTCGGCAC CGCGCAGGCG GAGATCCTGG TCATCGTCAG CCACGACGAC
TAG
 
Protein sequence
MTIRLKLLRK QKGWTLDVLA DETGLTKSYL SKVERGLSVP SIAVALKLSK ALNVDVEQLF 
SESRNRELIT VTRAGERTAM GAAADSHAHR FESIAAGVAP KKMLPFVVHP PHEFVASTFR
EHEGEEFLFV HKGRIEIEFP NETVQLKAGD SVYFNALIPH RTRSLGTAQA EILVIVSHDD