| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5517 |
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| Symbol | prpB |
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| ID | 4453466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2620817 |
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| End bp | 2621710 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639697578 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_839143 |
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| Protein GI | 116693610 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.36505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATA CGCATCTTCA GAGCGCCGGC GCGAAGTTCC GCGCGGCAGT CGCGGCCGAG
CAGCCGCTGC AGGTGGTCGG CGCGATCACC GCGTACGCGG CCAAGATGGC GCAGGCCGTC
GGCTTCAAGG CCGTGTACCT GTCGGGCGGC GGCGTCGCGG CGAACTCGCT CGGCATTCCC
GACCTCGGCA TCAGCACGAT GGAAGACGTG CTGATCGACG CGACCCGGAT CACCAACGCG
ACCGATCTGC CGCTGCTGGT CGACATCGAC ACGGGCTGGG GCGGCGCGTT CAACATCGCG
CGCACGGTCC GCTCGTTCAT CAACGCCGGC GTCGCGGCCG TGCACCTCGA GGACCAGGTC
GGCCAGAAGC GCTGCGGCCA CCGCCCGGGC AAGGAAGTCG TGCCGATCGA CGAAATGGTC
GATCGCGTGA AGGCCGCGGT CGATGCGCGT ACCGACGACC AGTTCGTGAT CATGGCGCGC
ACCGACGCGG CCGCCGCGGA AGGGATCGAC TCGGCGATCG AGCGCGCGGT CGCGTACGTC
GAAGCCGGCG CGGACATGAT CTTCCCGGAA GCGATGAAGA CGCTCGACGA CTACCGCCGC
TTCAAGGCCG CCGTGAAGGT GCCGATCCTC GCGAACCTGA CCGAGTTCGG CTCGACGCCG
CTGTTCACCG TCGACGAACT GCGCGAGGCG AACGTCGACA TCGCGCTGTA CTGCTGCGGC
GCGTATCGTG CGATGAACAA GGCCGCGCTG AACTTCTACG AGACGCTGCG CCGCGACGGC
ACGCAGAAGG CGGCCGTACC GACAATGCAG ACGCGCGCCG AGCTGTACGA CTTCCTCGGC
TATCACGAAT ACGAGCGCAA GCTCGACGAA CTGTTCGCGC AGGGCAAGAA GTAA
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| Protein sequence | MSNTHLQSAG AKFRAAVAAE QPLQVVGAIT AYAAKMAQAV GFKAVYLSGG GVAANSLGIP
DLGISTMEDV LIDATRITNA TDLPLLVDID TGWGGAFNIA RTVRSFINAG VAAVHLEDQV
GQKRCGHRPG KEVVPIDEMV DRVKAAVDAR TDDQFVIMAR TDAAAAEGID SAIERAVAYV
EAGADMIFPE AMKTLDDYRR FKAAVKVPIL ANLTEFGSTP LFTVDELREA NVDIALYCCG
AYRAMNKAAL NFYETLRRDG TQKAAVPTMQ TRAELYDFLG YHEYERKLDE LFAQGKK
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