Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5431 |
Symbol | |
ID | 4451468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2528983 |
End bp | 2531250 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639697492 |
Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
Protein accession | YP_839057 |
Protein GI | 116693524 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.469015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.608312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATTGCT ATACGCTGGC GCGGCGGCCG ATCTGTGCCG CGCTGTTCGG CGCGTTCGGC CTGTCCGCCG CCCCGGCTCA CGCCGATTCG TCGCCGCAAG GCGCCCCCCC GCCTTCCGCC GTCCTGACCG CCGCATCCGC GCGCGGCGAG GCGGCGCTGC TCGATCCCGT CACCGTCACG GCCACCCGCA CCGCCACCGC GGCGAGCCGC ACGGCGGCGT CCGTGTCGGT GATCACCGAC GAGGATCTCG AAGAGCAACA GGCCACCAAT ATCAAGGACG CGCTGCGCTA CGAGCCGGGC ATCACGGTGC GCCGCACCGC GTACCGGCCC GGCAGCGCCG CGCTCGGCGG CGGCCGCGAC GGCGATTCGA GCATCAACAT CCGCGGCCTC GAAGGCAATC GCGTGCTGCT GATGGAAGAC GGCATCCGCC TGCCGAACGC GTTCTCGTTC GGTCCGCTCG AAGCGGGCCG CGGCGACTAC GCCGATCTCG ACACGCTCAA GCGCATCGAG ATCCTGCGCG GGCCGGCGTC GGCGCTGTAC GGCAGCGACG GCCTGACCGG CGCGGTGAAC TTCATCACGA AGGACCCGCG CGACCTGCTG TCGATCTACC ACAAGCCTTA CTACTTCTCG TTCCGGCCGA GCTACGACTC GACCGACCGC AGCATCGGCG CGACCGTATC GGCCGCGGGC GGCAACGATC GCATCCAGGG GATGATCATC GCCGACGGCC GGCGCGGCCA CGAGGTCGAC ACGCGCGGCG ACAACAATTC GGCGAGCACG CTGCGCACGA CGTCGAATCC GCAGGACGTG TATTCGGAAT CGCTGCTCGG CAAGCTCGTG CTGACGCCCA CCACACGCGA CACGATCAAG TTCACCGCCG AAACGGTGCA GCGGCGCGTG AGCACCGACG TGCTGTCGGC GATCAATGCG CCGGCCACGC TCGGCCTCAC GACCCACGAC CGGCTCGAGC GCAACCGCTT CAGCGTCGAC TACGACTTTC GCGACGACGC GTTCCGCTGG TTCCAGACCG CGCACGTGCA GTTCTACTAC CAGGACGCGA AGCAGGACCA GTACGCGTTC GAGACGCGCG GCAGGCTACC CTCGCGTTCG CGCGACAACC AGTACAAGGA ACGCACGTTC GGCGGCGCCG CGTTCGCCGA AAGCGGCTTT TCGACCGGCC CGCTCGCGCA CAAGCTGTTG TACGGCGTCG ACGGCAGCCT GTCGCGCGTG ACGAACCTGC GCGACGGCAC GGTGCCGGGC GTCGGCGAAG CGTTCCCGAA CAAGGCGTTT CCCGACACCG ACTACACGCT GTTCGGCGCG TTCGTGCAGG ACCAGATCGG CTACGGCCGC CTGCTCGTCA CGCCGGGCCT GCGCTTCGAC ACGTACCGGC TGAGCCCGAC CGAAAACGAT CCGCTGTTCA CCGGCAAGGC CGTGTCGACG AGCGCCAACG AGCTGTCGCC GCGCGTCGCC GTGCTCTACG AAATCACTCC AGCGGTCATT CCGTACGTGC AGTACGCGCA CGGCTTCCGC GCGCCGACGC CCGACCAGGT GAACAGCAGC TTCTCGAACC CGGTGTACGG CTACACGTCG ATCGGCAATC CGAACCTGAA GCCCGAAACC AGCGACACGT TCGAAGCCGG CCTGCGCGGC AAGGCCGGCA CCGGCTACGG CGTCGTGCGC TACAGCGCGG CCGCCTTCAC CGGCCGCTAC CGCAACTTCA TCTCGCGTAC GACGCTCGCC GGCAGCGGCC GGCCGGTCGA CCCGTTCGTG TTCCAGTACG TGAACTTCGC CGACGCGCGC ATCCACGGCC TCGAAGGCCG CGCCGAATGG GTGATGCCGA ACGGCATCAC GCTGAAGACG GCGATGGCGT TCACGAAGGG CTCGACGCAG AACGACGGCG CGGCGAGCCA GCCGCTCAAT ACCGTGAACC CGTTCTCGGC CGTGTTCGGC GTGCGGTACG AGCCGACCGA ACGCTGGTTC GTGCAGACCG ACCTGCTGTT CCAGGCCGCC AAACGCGACA AGGACGTCGA CAAGTCCGAC TGTTCGAACA AGGCGTGCTT CACGCCGCCG TCGTCGTTCG TCGTCGACCT GCGCGGCGGC TATCGCTTCA ACAAGCACGT GAGCGCGACG ATCGGCATTC GCAACCTGTT CGACCGCAAG TACTGGAACT GGTCGGACGT GCGCGGCATC GCGGCCGATT CGCAGGTGCT CGACGCATAT TCGTCGCCCG GCCGCACGGT CGCCGTCAGC ATGAAAGTGG ATTTCTGA
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Protein sequence | MHCYTLARRP ICAALFGAFG LSAAPAHADS SPQGAPPPSA VLTAASARGE AALLDPVTVT ATRTATAASR TAASVSVITD EDLEEQQATN IKDALRYEPG ITVRRTAYRP GSAALGGGRD GDSSINIRGL EGNRVLLMED GIRLPNAFSF GPLEAGRGDY ADLDTLKRIE ILRGPASALY GSDGLTGAVN FITKDPRDLL SIYHKPYYFS FRPSYDSTDR SIGATVSAAG GNDRIQGMII ADGRRGHEVD TRGDNNSAST LRTTSNPQDV YSESLLGKLV LTPTTRDTIK FTAETVQRRV STDVLSAINA PATLGLTTHD RLERNRFSVD YDFRDDAFRW FQTAHVQFYY QDAKQDQYAF ETRGRLPSRS RDNQYKERTF GGAAFAESGF STGPLAHKLL YGVDGSLSRV TNLRDGTVPG VGEAFPNKAF PDTDYTLFGA FVQDQIGYGR LLVTPGLRFD TYRLSPTEND PLFTGKAVST SANELSPRVA VLYEITPAVI PYVQYAHGFR APTPDQVNSS FSNPVYGYTS IGNPNLKPET SDTFEAGLRG KAGTGYGVVR YSAAAFTGRY RNFISRTTLA GSGRPVDPFV FQYVNFADAR IHGLEGRAEW VMPNGITLKT AMAFTKGSTQ NDGAASQPLN TVNPFSAVFG VRYEPTERWF VQTDLLFQAA KRDKDVDKSD CSNKACFTPP SSFVVDLRGG YRFNKHVSAT IGIRNLFDRK YWNWSDVRGI AADSQVLDAY SSPGRTVAVS MKVDF
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