Gene Bcen2424_5426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5426 
Symbol 
ID4451463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2524794 
End bp2525600 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID639697487 
ProductYaeC family lipoprotein 
Protein accessionYP_839052 
Protein GI116693519 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.263894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.429699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGTT CGATCCTGAC CGGCCTCGGC GCACTCGCCG CCGCGCTGGC ATTCGCCGCG 
CCCGGCGCGC ACGCCGACTC CCAAACGCTG AAGATCGGCA CGATGAGCGG CCCCGACGCG
CAAATCTGGA CCGAAGTGAC GAAGGTCGCC GCGCGCGAAG GCCTCGCGAT CAAGGTCATC
GAATTCAACG ACTACGTGCA GCCGAACGCG GCGCTCGATG CGGGCGACCT CGATGCGAAC
GGCTTCCAGC ACCAGCCGTT CCTCGACAGC CAGATCAAGC AGCGCGGCTA CAAGATCGTC
AACGTCGGGC TGACCTACAC CGCGCCGATG GGCTTCTATT CGAAGAAGAT CAAGTCGCTG
AAGGATCTGC CGGTCGGCGC GAAAGTCGGG ATCCAGAACG ATCCGTCGAA CGGCAACCGC
GCGCTGCTGC TGCTGCAGAA ATACGGCGTG ATCAAGCTGA AGCCGGGCGT CGGCGCGAAC
GGCGTGAACG CGACGCCGCT CGACATCGCC GAGAACCCGA AGAAGATCAA GATCGTCGAG
CTCGATTCCG CGCAGTTGCC GCGCGCGCTG CCCGATGTCG ACGCCGCGTC GATCAACACC
GATTACGCGG TGAAGGCCGG ACTCACGCCG GTGAAGGATG CGATCGCGAT CGAGGATCTG
CGCGGCCCGT ACGCGAACCT GATCGCGGTG CGCGCGCAGG ACAAGGACAA GCCGTGGGTG
AAGAAGCTCG TCGCGGCCTA TGAATCGGAC GACGTGCGCA AGTTCATCGA CCAGAAGTTC
GGCGGCGCGA TCGTGCCGGC GTTCTGA
 
Protein sequence
MRRSILTGLG ALAAALAFAA PGAHADSQTL KIGTMSGPDA QIWTEVTKVA AREGLAIKVI 
EFNDYVQPNA ALDAGDLDAN GFQHQPFLDS QIKQRGYKIV NVGLTYTAPM GFYSKKIKSL
KDLPVGAKVG IQNDPSNGNR ALLLLQKYGV IKLKPGVGAN GVNATPLDIA ENPKKIKIVE
LDSAQLPRAL PDVDAASINT DYAVKAGLTP VKDAIAIEDL RGPYANLIAV RAQDKDKPWV
KKLVAAYESD DVRKFIDQKF GGAIVPAF