| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5424 |
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| Symbol | |
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| ID | 4451461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2522516 |
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| End bp | 2523298 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639697485 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_839050 |
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| Protein GI | 116693517 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.717172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.449482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAGA TTCTTGCGGC TGTGACCGTG GCCCTGCTCG CCGTATCGGC CGGCAGTGCA
TACGCGAAGG ACTGGTCGAC CGTGCGGTTC GGCGTCGACG CAAGCTACCC GCCTTTCGAA
TCGAAAGGCG CCGACGGCAA GGTGGTCGGC TTCGACGTGG ATCTCGGCAA CGAGATCTGC
CGCCGCATCA ACGCGAAATG CGTGTGGATC GAAAACGACT TCGACGGGAT GATCCCGGCG
CTGAAGGCCC GCAAGTTCGA CGGCGTGCTG TCGTCGATGT CGATGACGCC GGCCCGCGCC
GAACAGATCG CGTTCTCGTC GAAGCTGTTC AACACGCCGA CGCGCCTCGT CACGAAGAAG
GGCGCGAACC TGCAGCCGAC GGCCGAATCG CTGAAGGGCA AGTCGGTCGG CGTCGAGCAG
GGCACGATCC AGGAAACCTA CGCGAAGGCG CACTGGGCGT CGAAGGGCGT CAACATCGTG
CCTTACCAGA ACCAGGACCA GGTCTACGCC GACCTGATCT CCGGCCGTCT GGACGGCGCG
CTGCAGGACG CGGTGCAAGC CGAGATCGGC TTCCTGAAGA CGCCGCGCGG CGCGAATTTC
GACTTCGCCG GCAAGGACCT CGACGATCCG AAGACGCTTG GCAACGGCGC CGGCATCGGC
CTGCGCAAGG AAGACACCGA CCTGAAGGCG AAGATCGACG GCGCGATCGC CGGCATGCGC
AAGGACGGCA CGTACGACAA GCTCGCGAAG AAGTACTTCG ATTTCGACGT CTACGGCAAG
TAA
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| Protein sequence | MKKILAAVTV ALLAVSAGSA YAKDWSTVRF GVDASYPPFE SKGADGKVVG FDVDLGNEIC
RRINAKCVWI ENDFDGMIPA LKARKFDGVL SSMSMTPARA EQIAFSSKLF NTPTRLVTKK
GANLQPTAES LKGKSVGVEQ GTIQETYAKA HWASKGVNIV PYQNQDQVYA DLISGRLDGA
LQDAVQAEIG FLKTPRGANF DFAGKDLDDP KTLGNGAGIG LRKEDTDLKA KIDGAIAGMR
KDGTYDKLAK KYFDFDVYGK
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