Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5342 |
Symbol | |
ID | 4453809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 2433079 |
End bp | 2434440 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639697403 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_838968 |
Protein GI | 116693435 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.71249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.508922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATG AGATTCGGGT GCTGGTCGTC GAGGATGATG AAAACGTCCG GATCGGCGTC GAGCAGGCCG TCGCGCTCGC CGGGTTCCCG GTCGACGCGT TCGCGTCGGC CGCCGACGCG CTCGCGCACG TCGCGCCCGG CGCGCCGGTG GTGATCGTGT CGGACGTGCG GATGCCGGGC ATCGACGGGC TGCAGTTGCT CGACCGCGTG ATGGCCATCG ATGCGCAGAT CCCGGTCGTA CTAATCAGCG GCCACGCGGA CATCTCGACG GCCGTCGGCG CGATGCAGGT CGGCGCGTAC GACTTCATCG AGAAACCGTT CTCGTCGGAC CTGATCGCCG GCCGCGTCGC GCGCGCGGTC GAGAAGCGTC GCCTGACGCT CGAGGTGCAG GGGCTGCGCG CGGCGCTGAA CAACTGGCAG GGCATCGAGG CGTTCGTGCT CGGCAAGTCG CCCGCGATGG CCGACGTGCG CAAGAAGATC CTGCGCCTCG CCGATACGTC GGTGTCGGTG CTGATCACCG GCGAGACGGG CACCGGCAAG GAACTGATCG CGCGCAGCCT GCACGACTTC GGCGGTCGGC GCGACGCGCA TTTCGTCGCG CTGAACTGCG GCGGCCTGCC CGAGCAGGTG TTCGAGAGCG AGCTGTTCGG CCATGAGGCC GGCGCGTTCA CCGGTGCGAT CAAGAAGCGC ATCGGCAAGA TCGAATGGGC GGACGGCGGC ACGCTGTTCC TCGACGAGAT CGAGACGATG CCGATCGCGC TGCAGATCAA GATGCTGCGC GTGCTGCAGG AGCGCGTGGT CGAGCGGCTC GGCGCGAACG ACCTGATTCC GGTCGACTGC CGCGTGGTGG CCGCATCGAA GGCCGATCTC GCCGAACTCG CCGCCGACGG GCGCTTTCGC GCGGATCTGC TGTATCGCCT CAACGTCGCG CAGATCGAGT TGCCGCCGCT GCGCGAACGG CGCGAGGACG TGCCGCTGCT GTTCGAGCAT TTCGTGCTCG CGGCCGCGCG GCGCTTCGGG CAGCCGGCGC CGGTCGTCAC CGCCGCGCAG GTGTCCGAAC TGATGATGCA CGCGTGGCCC GGCAACGTGC GCGAACTGCA GAACGTGGCC GACCGCTTCG TGCTCGGGCT GACCGGCGAC AGCCTGCTGT CGTCCGGCGG CGCACCGACG GCCGGCAGCA CGCTCGCGGA ACAGCTCGCG TATTTCGAGC GGATGCTGAT CGAGGACATG CTGCGGCGTC ACAACGGCAA CGTCGCGGAC GCGAGCGAGG CGCTCGGCAT GCCGAAGAAA ACGCTCTATC ACAAGCTGCG CAACCTGCGG ATTCCCGCGC GCGGCGACGC GGCGGCCGAC GGCGGCGAAT GA
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Protein sequence | MEDEIRVLVV EDDENVRIGV EQAVALAGFP VDAFASAADA LAHVAPGAPV VIVSDVRMPG IDGLQLLDRV MAIDAQIPVV LISGHADIST AVGAMQVGAY DFIEKPFSSD LIAGRVARAV EKRRLTLEVQ GLRAALNNWQ GIEAFVLGKS PAMADVRKKI LRLADTSVSV LITGETGTGK ELIARSLHDF GGRRDAHFVA LNCGGLPEQV FESELFGHEA GAFTGAIKKR IGKIEWADGG TLFLDEIETM PIALQIKMLR VLQERVVERL GANDLIPVDC RVVAASKADL AELAADGRFR ADLLYRLNVA QIELPPLRER REDVPLLFEH FVLAAARRFG QPAPVVTAAQ VSELMMHAWP GNVRELQNVA DRFVLGLTGD SLLSSGGAPT AGSTLAEQLA YFERMLIEDM LRRHNGNVAD ASEALGMPKK TLYHKLRNLR IPARGDAAAD GGE
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