Gene Bcen2424_5198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5198 
Symbol 
ID4453052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2250695 
End bp2251528 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID639697254 
Productalpha/beta hydrolase fold 
Protein accessionYP_838824 
Protein GI116693291 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.581838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00844034 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTACT TTAAGTCGGG TGACGATACC GAAATTTTCT ACAAGGACTG GGGCCATGGC 
ACGCCCGTTG TTTTCTCGCA CGGCTGGCCG CTGACTTCGG ATGCATGGGA TGCGCAAATG
CTGTTCTTCG GCCGTCGCGG CTACCGGGTC ATTGCGCACG ACCGTCGAGG GCATGGTCGC
TCGGCGCAGC CGTGGGACGG CAATGATATG GATACCTATG CGGACGATTT GGCTGCGCTG
CTCGATCACC TTGACGTGCG CGGTGCGATG CTGGTGGGCC ATTCCACGGG TGGCGGCGAG
GTGGCGCACT ACATCGGCCG TCACGGCACG GCACGTGTGG CGAAAGTGGT GCTGATCGGT
GCGGTACCGC CGATCATGCT GAAGACGGAA GCGAACCCGG GCGGCTTGCC GATGGAAGTG
TTCGACGGTA TTCGCGAAGG TGTTTTGAAG AACCGCTCGC AGTTTTACAG GGATCTGGCG
GTGCCGTTCC ACAACTTCAA TCGTGAGGGT GCGACGGTTT CGCAGGGGAC GATAGATTCG
TTCTGGTCGC AGGGCATGAT GGGCTCGATC AAGGGCCAGT TCGACTGTAT CCGGGAGTTC
TCGGAAGTGG ATTACACCGA GGATCTTCGA AAGATCAACG TGCCGGTACT GGTGTTGCAC
GGAGACGACG ACCAGATCGT TCCGATCGAC GCGTCGGCGC GCCGGACGGC CGCGATTGCG
CCGAATGTGA CGCTGAAGGT GTATCCGGGC GGATCGCACG GGATCGCGAT CACGCACGCC
GATCAGGTCA ATGCGGATCT GCTCGCTTTC TTCGAGAACA CGACACGCAA GTAA
 
Protein sequence
MSYFKSGDDT EIFYKDWGHG TPVVFSHGWP LTSDAWDAQM LFFGRRGYRV IAHDRRGHGR 
SAQPWDGNDM DTYADDLAAL LDHLDVRGAM LVGHSTGGGE VAHYIGRHGT ARVAKVVLIG
AVPPIMLKTE ANPGGLPMEV FDGIREGVLK NRSQFYRDLA VPFHNFNREG ATVSQGTIDS
FWSQGMMGSI KGQFDCIREF SEVDYTEDLR KINVPVLVLH GDDDQIVPID ASARRTAAIA
PNVTLKVYPG GSHGIAITHA DQVNADLLAF FENTTRK