| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5185 |
|---|
| Symbol | |
|---|
| ID | 4452954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2234715 |
|---|
| End bp | 2236040 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639697241 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_838811 |
|---|
| Protein GI | 116693278 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0231345 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAATTGA ACGCTACGGG AATATCCGAT TCCTTGCCCG TGATTACCAC GGTCGATGCA
GCCAGAGCCG ATCGCATTTT CAAGCGACTC GCGCTGCGAG TTCTGCCGAT CTTTATGTTT
GCGTATCTTG CGTCCTATAT TGATCGCGTC AACGTAAGTT TCGCTAAACT TCAGCTTAGC
CAGGACCTGG GATTTACCGA TGCCGTTTTC GGTTTTGGTG CGGGCACATT CGCGTTGGGC
TATGTACTAT TTGAAGTTCC GAGCAACATG CTATTGCAGA AGGTCGGGGC AAAACGATGG
CTGACACGCA TTATATTGGC GTGGGCGATC GTCTCGGCTC TAACCACATT GATTGCCACA
CCAAAGCAGT TCTATGTCAT GCGTTACCTC CTCGGAGTAA CGGAGGCCGG CCTCGTTCCG
GGTGTCGTAT ATTATATTTC TCAGTCGTTC CCGCGCTTCC ACAGAGCACG AATTTTGTCC
ATATTCTATA CGGCACTCCC AATGGCTGGC CTGATTGGAT CCCCCATGAG TGGATTCATC
ATGGAATATC TCGATAGTCT TCTGAGCCTC GCCGGCTGGA AGTGGATGTT GATCATCGAG
GCAATTCCAG CCTTCGTCGC CGCTATCATG TGCTGGAAAT ATCTGGAAGA CGACGTCACC
CAAGGAAACC ACCGATCCGA ATCAGATCGT AACTACCTTA TTAGCGCGCT TGAAGAGGAC
AAGTCAATAG CCGCATCAAT AAATCAGAAC AATATCTTTT CAAGCAAGAT TTTCTGGATT
TTTGGAATTA TTTATTTTCT CGATGTTTTT GGAATTTACG GCTACACACT CTGGGCGCCA
ACCATCATCA AATCGCTCGG TGTAGAGCGT AATTCCTTGA TCGGGCTCCT CGCCGCGCTG
CCCAATGCGG TTGCCGTTAT CGTAATGATA ATTGCCGGTC GGAAGGCCGA TAGTCGCAGG
GAGCGCAGGC TGCTCGTCGC CGCATTATTC CTGATGGCCG CCGCAGGTCT GACTCTCGCA
CTTGTCTGGC ACGGCACGCT TTGGCTGAGC ATTGCGGCGC TCTGTATTGC CAACGCGGGA
TTATTGTCCA TCCCCCCAAT ATTCTGGGGT ATGCCAACTG CCGTCCTCTC CCCCCGCAAT
GCCGCGAGCG GCATCGCGTG GATCAGCGCA ATAGGCAATA TAGGCGGCTT CTTCGGCCCC
TATGTCGTGG GCTTATTGAA ACAGTCCTCG GGCAGCTTCG TACCGGCGAT CTATTGCATC
ATCGCATGCC TTCTATTCGG GCTAATTCTC ACACTCTTAT TACCGAAGCA CTTGGTCAAT
CGCTAG
|
|---|
| Protein sequence | MELNATGISD SLPVITTVDA ARADRIFKRL ALRVLPIFMF AYLASYIDRV NVSFAKLQLS
QDLGFTDAVF GFGAGTFALG YVLFEVPSNM LLQKVGAKRW LTRIILAWAI VSALTTLIAT
PKQFYVMRYL LGVTEAGLVP GVVYYISQSF PRFHRARILS IFYTALPMAG LIGSPMSGFI
MEYLDSLLSL AGWKWMLIIE AIPAFVAAIM CWKYLEDDVT QGNHRSESDR NYLISALEED
KSIAASINQN NIFSSKIFWI FGIIYFLDVF GIYGYTLWAP TIIKSLGVER NSLIGLLAAL
PNAVAVIVMI IAGRKADSRR ERRLLVAALF LMAAAGLTLA LVWHGTLWLS IAALCIANAG
LLSIPPIFWG MPTAVLSPRN AASGIAWISA IGNIGGFFGP YVVGLLKQSS GSFVPAIYCI
IACLLFGLIL TLLLPKHLVN R
|
|---|
| |