Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5169 |
Symbol | |
ID | 4452938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2215877 |
End bp | 2216773 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639697225 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_838795 |
Protein GI | 116693262 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.234751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.931237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCCG TTTATGCGGC CGATCCGCCC GTGTGCAAGA ACGTGCGCTT CGCGGATGTC GGCTGGTCCG ACATCGCGGC GACCACGGGC CTCGCGTCGA CGATGCTGCA GGGGCTCGGC TACAACCCGA CGAAGACGAT CGCCTCGGTG CCGATCACGT TCGCGGGGAT CAAGAGCAAG CAGATCGATG TGTTCCTCGG CTACTGGTCG CCGACGATGG ACCCGATCAT CCAGCCGTTC ACGAAGGCCG GCACGATCAA GGTGCTCGCG ACGCCGAACC TGACCGGCGC GAAATACACG CTCGCGGTGC CCGACTACGT GTACCAGGGC GGCCTGAAGT CGTTCGCGGA CATCCAGAAG TACGCGGACA AGCTGAACGG CAAGATCTAC GGGATCGAGC CGGGCAACGA CGGCAATGCG CTGATCAAGA AGATGATCGA CGGCAACCAG TTCGGCCTCG GCAAGTTCAA GCTGGTCGAG TCGAGCGAGG CCGGGATGCT GGTCGAAGTG AATCGCGCGG CCCGCGACAA GCAGTGGATC GTGTTCCTTG GGTGGGAACC GCATCCGATG AACGTGCAGA TGAAGATCGA CTACCTGACC GGCGGCGACG ATGTGTTCGG CCCGAACTAC GGCGAAGCGA AGGTGCTGAC CGCAACCCCG CCCGATTACG CGCAACGCTG CCCGAACGTC GCGAAGTTCG TGTCGAACCT GCAGTTCACG ACGTCGATCG AGAACCACGT GATGGTGCCG ATCATGAACA AGCAGGACCC GAACAAGGCC GCCGCCGACT GGCTGAAGGC GAACCCGCAA GCGCTCGACA AGTGGCTGGC CGGCGTGACG ACGCTCGACG GCAAGCCCGG CCTGCCGGCG GTGAAGGCGT ACCTCGGCGT GCATTGA
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Protein sequence | MSAVYAADPP VCKNVRFADV GWSDIAATTG LASTMLQGLG YNPTKTIASV PITFAGIKSK QIDVFLGYWS PTMDPIIQPF TKAGTIKVLA TPNLTGAKYT LAVPDYVYQG GLKSFADIQK YADKLNGKIY GIEPGNDGNA LIKKMIDGNQ FGLGKFKLVE SSEAGMLVEV NRAARDKQWI VFLGWEPHPM NVQMKIDYLT GGDDVFGPNY GEAKVLTATP PDYAQRCPNV AKFVSNLQFT TSIENHVMVP IMNKQDPNKA AADWLKANPQ ALDKWLAGVT TLDGKPGLPA VKAYLGVH
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