| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5146 |
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| Symbol | |
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| ID | 4451170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2193627 |
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| End bp | 2194313 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639697202 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_838772 |
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| Protein GI | 116693239 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00474071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGAC GGTTCTTCTG GCTGATCGTG CTTTCGCTCG GCATTGCGCA GCACGCCGCG
GCGCAGCAGG CGCCCGCCTT GCCTGCCTCT GCGCCCGAAG CAGCCGCATC CGCGCCAGGC
GATGCATCCG CACCGCTCGC CAACGATCAG CCTAACGAAG CAAACCGCCG CATCACGTCC
TACCTGACGA AGAAATTCGG CGTCGCGAAG GAACGCGCCG CGAAGCTCGC CGATATCGTG
AGCGTCACTG CGACGAAATA TTCGCTGCCG CCGGCACTCG TTTACGCGAT TATTTCGATC
GAATCGCGCT TCCAGGAAAA GGCACGCGGC CAGCATGGCG CGACCGGGTT GATGCAGGTC
GTGCCGTCCG CGCACCGCGG CATGCTGCGC AACGTGAAGG ATTTGACGGA GCCGAATGCG
AACGTCGAAG TCGGCTCGCG CATTCTGTCG GGCTACGTGA AGGCGGCCGG CGGCAACGTG
CAGGCCGGGC TGAAGAGCTA CAGCGGCGGA TCGAGTGCGT ATGCGGCGAA AGTGATGCAG
CGGGTCGATT CGTTCCGGTT CGTGCTCGAA CCCGAGGACG ACGCGAAAAG CGCGAATACC
GCGAACGACG CGAACAACGC GAAGGCGCAC ATGGTGCCGG TCAGCGATCC GTCACCGGCG
CCGGCCGCGA ACCGCAACAC GAAGTAA
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| Protein sequence | MRRRFFWLIV LSLGIAQHAA AQQAPALPAS APEAAASAPG DASAPLANDQ PNEANRRITS
YLTKKFGVAK ERAAKLADIV SVTATKYSLP PALVYAIISI ESRFQEKARG QHGATGLMQV
VPSAHRGMLR NVKDLTEPNA NVEVGSRILS GYVKAAGGNV QAGLKSYSGG SSAYAAKVMQ
RVDSFRFVLE PEDDAKSANT ANDANNAKAH MVPVSDPSPA PAANRNTK
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