| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5094 |
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| Symbol | |
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| ID | 4453670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 2125356 |
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| End bp | 2126951 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639697150 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_838720 |
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| Protein GI | 116693187 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.584258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CGTCGCCGCT GCACGACGAG AGCGGCGCGC CGTCCGCGTT CGACGTGCCG
GCGCCCGCGC CGGCCGCACA GCCGGTGCGC GGCATCCGGC TCGCGCTGCT GACGTTCGCG
CTGTCGCTCG CGACCTTCAT CGAGGTGCTC GACTCGACCG TGACGAACGT CGCGGTGCCG
GCGATCTCGG GCAGTCTCGG CGTATCGAAC AGCCAGGGCA CGTGGGTGAT CAGCTCGTAT
TCGGTCGCGG CCGCGATCGC GGTGCCGCTC ACCGGCTGGC TCGCCCGCCG TGTCGGCGAG
CTGCGGCTGT TCGTCGGCGC GGTGCTGTTG TTTACGCTGA CGTCGCTGCT GTGCGGGCTC
GCGCGCGACC TGCACGTGCT CGTGATCTGC CGCGCGCTGC AGGGGCTGTG TTCGGGGCCG
ATGGTGCCGC TGTCGCAGAC GATCCTGCTG CGCACGTTCC CGCCCGACAA ACGCACGATC
GCGCTCGCGC TGTGGGCGAT GACGGTGCTG CTCGCGCCGA TCTTCGGGCC GGTGGTCGGC
GGCTGGATCG TCGACAACTT CTCGTGGCCG TGGATCTTCC TGATCAACTT GCCGATCGGG
CTGTTCTCGT TCGCGGTGTG CACCGCGATG CTGCGCCCCG ACGCGCAGCG CGGCGCGGCC
GGCCCGATCG ACGTGCCGGG CATCGTGCTG CTCGTGATCG GCGTCGGCTC GCTCCAGGCG
ATGCTCGATC TCGGCCACGA CCGCGGCTGG TTCGATTCGC CGCTGATCGT CACGCTCGCG
GTGGTCGCGG CGCTCGCGAT CGTGTCGCTG CTGATCTGGG AAGCGGGCGA AGCGCATCCG
GTGGTCGACC TGAGCCTGTT TCGCGACCGC ACGTTCTCGT TCTGCGTGCT GATCATCTCG
CTCGGGATGA TGAGCTTCTC CGTGGTCGGC GTGGTGTTTC CGCTGTGGAT GCAGGCCGTG
ATGGGCTACA ACGCGTTTCA TGCGGGGCTC GCGACCGCGT CGCTCGGCGT GCTCGCGCTG
GTGTTCTCGA TCCTCGTCGG GCTGCATGCG CACCGCTTCG ATGCGCGCGT GCTCGCGACG
TTCGGCTTCC TCGTGTTCGC GGCCGTGCTC GCCTGGGACG CGCAGTTCAC GCTGAAGATG
ACGTTCGCGC AGATCGCAGC ACCCGGGCTG ATCCAGGGCA TCGGGCTGCC GTGCTTCTTC
ATCCCGCTGA CCGCCGCGAC CTTGTCGCGC ATTCCGGACG ACCGGCTCGC CGCCGCGTCG
AGCCTGTCGA ATTTCCTGCG CACGCTGTCG GCCGCGTTCG GCACCGCGAT GAGCGTGACG
CTGTGGGACA ACCGCGCGAC CTATCACTAC GACGTCGTGT CGCAATCGGT CACGCATGCG
TCGGCGAACA CGCAACGCTT CGTGCATGCG TTGAACGCGA TGGGCGTGGA CGGCGTGCGC
GAACTGACGA CCTTGCATCA CGTCGTGATG CAGCAGGCCT ACATGATGGC GACCAACGAC
ATGTTCTGGA TGGCGAGCAT GACGTGTCTC GCGCTCGCCG CGATGATGTG GCTGACGCGG
CCCAAGCGCG GCGCGGCCGC ATCGTTCGGG CATTGA
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| Protein sequence | MSTASPLHDE SGAPSAFDVP APAPAAQPVR GIRLALLTFA LSLATFIEVL DSTVTNVAVP
AISGSLGVSN SQGTWVISSY SVAAAIAVPL TGWLARRVGE LRLFVGAVLL FTLTSLLCGL
ARDLHVLVIC RALQGLCSGP MVPLSQTILL RTFPPDKRTI ALALWAMTVL LAPIFGPVVG
GWIVDNFSWP WIFLINLPIG LFSFAVCTAM LRPDAQRGAA GPIDVPGIVL LVIGVGSLQA
MLDLGHDRGW FDSPLIVTLA VVAALAIVSL LIWEAGEAHP VVDLSLFRDR TFSFCVLIIS
LGMMSFSVVG VVFPLWMQAV MGYNAFHAGL ATASLGVLAL VFSILVGLHA HRFDARVLAT
FGFLVFAAVL AWDAQFTLKM TFAQIAAPGL IQGIGLPCFF IPLTAATLSR IPDDRLAAAS
SLSNFLRTLS AAFGTAMSVT LWDNRATYHY DVVSQSVTHA SANTQRFVHA LNAMGVDGVR
ELTTLHHVVM QQAYMMATND MFWMASMTCL ALAAMMWLTR PKRGAAASFG H
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