Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4913 |
Symbol | ftrA |
ID | 4452539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1913886 |
End bp | 1914848 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639696969 |
Product | transcriptional activator FtrA |
Protein accession | YP_838540 |
Protein GI | 116693007 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.860168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.680733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACAATC ATCTCGTCGT CGCGCTCGCC TACGATCGCC TCTGCACGTT CGAATTCGGC TGCGTGGTCG AACTGTTCGC GCTCGAGCGT CCGGAACTCG GCGTCGACTG GTATCGCTTC GCGGTCTGCG CGAGCGAGCC GGGGCCCGTG CGCGCGGCGG GCGGCATTAC CGTTGCCGCG CCTTACCGGC TCGCGACGCT CGATCGCGCG GACACCATCG TGATTCCCGG CTGGCGCGAT CCGGACGAAC TGCCGCCCGA GCCGCTGCTG AAGAAGCTGC GGGCCGCGCA CCGGCGCGGC GCGCGGCTCT GCTCGATCTG TTCGGGCGTG TTCGTGCTGG CGGCGGCCGG CGTGCTCGAC GGCCTTACCG TGACGACGCA CTGGCGGTAT GCGGAACGTC TGCAGGCGCG TTATCCGGCG CTGCGCGTGA ATCCCGATGC GCTGTACGTC GACGAAGGGC AGATCGTCAC GTCGGCCGGC TCGGCGGCGG GGCTCGACAT GCTGCTGCAT CTGGTGCGCC GCGATCATGG CGGCGCGATC GCCAACCGCG TCGCGCAGCG CCTCGTGCTG CCGCCGCATC GCGACGGCGG ACAGGCGCAG TTCGTGCCGC GTCCGGTCGC ACCGGGCGGC ACCGACCGGC TCGCGAAGCT GATCGACTGG ATGCGCGCGC ATGCGGCCGA GCCGCACACG CTCGCGTCGC TGGCCGCGCA GGCCGCGATG AGCACGCGCA CGCTGCAACG GCAGTTCGCG GATGCGACGG GGATGTCGCC GCTCGCGTGG CTGATCCGCG AACGCGTGAA CGTCGCGAAG GACATGCTCG AAGCCCAGCC CGCGTTGTCG CTTGCGCAGG TCGCGGCGCG CGCGGGGTTC GGTTCCGAGG AATCGCTGCG CCGGCATTTC CGGCGCGTCG CGGCGACGAG CCCGGCCGCG TACCGGCGCG GGATGGATCG CGGCGGCACG TAG
|
Protein sequence | MHNHLVVALA YDRLCTFEFG CVVELFALER PELGVDWYRF AVCASEPGPV RAAGGITVAA PYRLATLDRA DTIVIPGWRD PDELPPEPLL KKLRAAHRRG ARLCSICSGV FVLAAAGVLD GLTVTTHWRY AERLQARYPA LRVNPDALYV DEGQIVTSAG SAAGLDMLLH LVRRDHGGAI ANRVAQRLVL PPHRDGGQAQ FVPRPVAPGG TDRLAKLIDW MRAHAAEPHT LASLAAQAAM STRTLQRQFA DATGMSPLAW LIRERVNVAK DMLEAQPALS LAQVAARAGF GSEESLRRHF RRVAATSPAA YRRGMDRGGT
|
| |