Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4909 |
Symbol | |
ID | 4452535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1909371 |
End bp | 1910030 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639696965 |
Product | TfoX domain-containing protein |
Protein accession | YP_838536 |
Protein GI | 116693003 |
COG category | [K] Transcription |
COG ID | [COG3070] Regulator of competence-specific genes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.613988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGGC AGGCGGAGAA GGCGCACGGC GAGGAAATCG CGTATCAGCT TGCGCCGCTG GGTACGGTCG CCGTTGCACG GTTCTTCAGC GGCGCGGCGT TGCGGCTCGA CGGCGTGATG TTCGGCTTCA TGTCGCGCGG GTCGCTGTTC CTGCGGGTCG ACGATGTGAA CCGGCCGGCG TTCGTCGCGG CCGGGATGGG GCCGTTCTCG TATGCGCGGC CTACGCGCAC CGTCTCGCTC GAGGGCTATT ACGAAACGCC GGCCGACGTG CTCGAGGACG CGGGTGCGCT GTTCGACTGG TGTCGCAGCG CGTATCGCGC GGCGCTGCTG GCCGGGCCGC CGAAGCGCAA GGCGAGGGCG GCGTCGAAGA CGGTATCTGG GGCGGGGCCG AAAGCCGCGC CGAAAACTGC AGTGAAGGCT GCGCCGAAAC CGGCGTCGAA ATCGTCAACG AACCCGGCAA CGAAACCGGC AACGAAACCC CTATCGAAAC CGGCGACGAA GCCTGCAACA AAACCGGCAA CGAAACCCGC GTCGGCCCAG AAAACGAAGC AGGCGGCGAA ATCCACATCG AAACCGGCGT CGGCGCAGAA ACCGAAACCG GCATCGAAAT CATCGCCCGC ACCGGCACCG AAACGCGTGG CGAAGCGTAA GCAGACGTAG
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Protein sequence | MSWQAEKAHG EEIAYQLAPL GTVAVARFFS GAALRLDGVM FGFMSRGSLF LRVDDVNRPA FVAAGMGPFS YARPTRTVSL EGYYETPADV LEDAGALFDW CRSAYRAALL AGPPKRKARA ASKTVSGAGP KAAPKTAVKA APKPASKSST NPATKPATKP LSKPATKPAT KPATKPASAQ KTKQAAKSTS KPASAQKPKP ASKSSPAPAP KRVAKRKQT
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