Gene Bcen2424_4909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4909 
Symbol 
ID4452535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1909371 
End bp1910030 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID639696965 
ProductTfoX domain-containing protein 
Protein accessionYP_838536 
Protein GI116693003 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.613988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC AGGCGGAGAA GGCGCACGGC GAGGAAATCG CGTATCAGCT TGCGCCGCTG 
GGTACGGTCG CCGTTGCACG GTTCTTCAGC GGCGCGGCGT TGCGGCTCGA CGGCGTGATG
TTCGGCTTCA TGTCGCGCGG GTCGCTGTTC CTGCGGGTCG ACGATGTGAA CCGGCCGGCG
TTCGTCGCGG CCGGGATGGG GCCGTTCTCG TATGCGCGGC CTACGCGCAC CGTCTCGCTC
GAGGGCTATT ACGAAACGCC GGCCGACGTG CTCGAGGACG CGGGTGCGCT GTTCGACTGG
TGTCGCAGCG CGTATCGCGC GGCGCTGCTG GCCGGGCCGC CGAAGCGCAA GGCGAGGGCG
GCGTCGAAGA CGGTATCTGG GGCGGGGCCG AAAGCCGCGC CGAAAACTGC AGTGAAGGCT
GCGCCGAAAC CGGCGTCGAA ATCGTCAACG AACCCGGCAA CGAAACCGGC AACGAAACCC
CTATCGAAAC CGGCGACGAA GCCTGCAACA AAACCGGCAA CGAAACCCGC GTCGGCCCAG
AAAACGAAGC AGGCGGCGAA ATCCACATCG AAACCGGCGT CGGCGCAGAA ACCGAAACCG
GCATCGAAAT CATCGCCCGC ACCGGCACCG AAACGCGTGG CGAAGCGTAA GCAGACGTAG
 
Protein sequence
MSWQAEKAHG EEIAYQLAPL GTVAVARFFS GAALRLDGVM FGFMSRGSLF LRVDDVNRPA 
FVAAGMGPFS YARPTRTVSL EGYYETPADV LEDAGALFDW CRSAYRAALL AGPPKRKARA
ASKTVSGAGP KAAPKTAVKA APKPASKSST NPATKPATKP LSKPATKPAT KPATKPASAQ
KTKQAAKSTS KPASAQKPKP ASKSSPAPAP KRVAKRKQT