| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4902 |
|---|
| Symbol | |
|---|
| ID | 4452528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1902959 |
|---|
| End bp | 1903516 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639696958 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_838529 |
|---|
| Protein GI | 116692996 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.634753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAC AGGAAGAGAT AGAAAGTCTG GCGATTCTGA TCCGCGACCT GCGCAAGCAT
CGCAAGGTCA CGCTGAACGA TCTCGCCGAA CGGATCGGCC GCTCGGTCGG CTTTCTGTCG
CAGGTCGAGC GCGGGCTGTC GCGCCCGACG GTCGCGGATC TCACCGCGAT CGGCGAGGCG
CTCGGCGTGC CGACCACGTA TTTCTACAGC CTGAGCAAGC CGCGCAGCGT GCGGTGGGTC
ACGCGGCCCG ACGAGCGGCG CACCGTGTAT TACGCGGCCG GCATTACCGA CATCCTCGTG
TCGCCGAACA TGCGTGCGCG CTTCTCGATC CTCGAAAGCC ATCTCGAGCC GGGCGCCAGC
AGCGGAGAGC GGCCGGTCGA CGACAGCGAC GAGCAGGGCG GCTTCGTGCT CGAAGGAGAA
CTGACGATCT GGATCGACGG CGACGACACG CCGGTCACGC TCGGTCCGAA CGATGCATTC
CAGCTTCCCG CGCACAAGCG CTTCCGTTAC GCGAACCTGA CTGATGCGCC GACGCGCGTG
ATTTGGGTAT TCACCTGA
|
|---|
| Protein sequence | MNEQEEIESL AILIRDLRKH RKVTLNDLAE RIGRSVGFLS QVERGLSRPT VADLTAIGEA
LGVPTTYFYS LSKPRSVRWV TRPDERRTVY YAAGITDILV SPNMRARFSI LESHLEPGAS
SGERPVDDSD EQGGFVLEGE LTIWIDGDDT PVTLGPNDAF QLPAHKRFRY ANLTDAPTRV
IWVFT
|
|---|
| |